Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00918 ATGGAACCTCAACAACCACAAGGGAGCCAACCAAACGAGGATGGTGGCAGTGGAAAAGGGGGGTTTCTGAGCAGGCAAAGTAGTACACGGTGGACTCCCACAACCGACCAGATAAGAATATTGAAGGACCTTTACTACAACAATGGAATTAGATCCCCAAGTGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGTAAGATTGAAGGCAAGAATGTCTTTTATTGGTTCCAGAACCACAAAGCTCGAGAAAGGCAGAAGAAAAGGTTCACTTCTGATAATGTGCCCATGCAAAGAGCTGCTCCAACTAATGCTGCTCCTTGGAAACCTGATCAAGATCCTATTCATACCAAGTATTCTAACATTTCTTCTACTGGGATCTCTTCTGCATCATCTTCTTCTGTTGACATGGTTCATGTGGGGCAGATGGGGAATTATGGCTACGGTTCTGTGCCCATGGAGAAAAGTTTTAGGGACTGCTCAATATCTGCCGGGGGTAGCAGTGGCCATGTTGGAATAAACCACAACTTGGGATGGATCGGTGTGGATCCATATTCCTCAGCCTACGCCAACTTCTTTGACAAAATAAGGCCAACTGAAGAAACCCTGGAAGAAGAACAAGAAGAGGATGGTGCTACTGAGATTGAAACTCTCCCTTTATTCCCTATGCACGGTGAGGACATTCATGGTTATTGCAACCTCAAGTCTAATTCTTACAACTATGATGGAAACGGCTGGTATCATACTGAAGATGGGTTCAAGAATGGTTCTCGTGCTTCTTTGGAGCTCAGTCTCAACTCCTACAAATCTCCAGATTTCGCTTAA 834 0.4532 MEPQQPQGSQPNEDGGSGKGGFLSRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDNVPMQRAAPTNAAPWKPDQDPIHTKYSNISSTGISSASSSSVDMVHVGQMGNYGYGSVPMEKSFRDCSISAGGSSGHVGINHNLGWIGVDPYSSAYANFFDKIRPTEETLEEEQEEDGATEIETLPLFPMHGEDIHGYCNLKSNSYNYDGNGWYHTEDGFKNGSRASLELSLNSYKSPDFA 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00918 277 ProSiteProfiles 'Homeobox' domain profile. 24 90 IPR001356 GO:0003677
Spst2g00918 277 MobiDBLite consensus disorder prediction 103 124 - -
Spst2g00918 277 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 8 272 IPR044555 GO:0003700|GO:0099402
Spst2g00918 277 SUPERFAMILY Homeodomain-like 22 96 IPR009057 -
Spst2g00918 277 Pfam Homeodomain 28 89 IPR001356 GO:0003677
Spst2g00918 277 Gene3D - 23 89 - -
Spst2g00918 277 SMART HOX_1 26 94 IPR001356 GO:0003677
Spst2g00918 277 MobiDBLite consensus disorder prediction 1 34 - -
Spst2g00918 277 CDD homeodomain 29 91 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00918 Spst-Chr2 7897406 7898935 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00918 22 230 Wox Gene Family AT2G17950 46.400 3.78e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Spst2g00918 Homeodomain 1.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00918 - - vra:106776674 495.352