Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00905 ATGATTTCTTCTCTCGCCTTCTCACCGACTCTTCCCGCCCCAAGCTTCTCCGGCAACGCCCTCGCCTCGCCATCGTGTCGCGTCAGATCCCGCCCTATAGTCGCCTTCGCCACTGCCACCGCCACTGCGACCGAGGAAGCTCGCTCCTCCTGGATGGAGAAACCACGCCCTTCGTATCTCAACTCCTCGTGCTCTTCCCTCTACGATATACTCGGCATCCCCGCCGGCGCCTCCAACCAGGAAATCAAGGCGGCGTACCGGCGATTGGCCAGAGTCTGCCACCCGGATGTCGCGGCAATCGACCAGAAAAACTCCTCCGCGGACGAATTCATGAAGATCCACGCCGCGTACTCCACTCTCTCGGATCCTGACAAGCGCGCTAACTACGACCGGAGCCTTTTCCGGCGACAACGGCCGCTCTCGACGGCGCCGGTGTTCTCCGGCTACACGCGTCGGAACTGGGAAACGGATCAGTGCTGGTAA 483 0.6149 MISSLAFSPTLPAPSFSGNALASPSCRVRSRPIVAFATATATATEEARSSWMEKPRPSYLNSSCSSLYDILGIPAGASNQEIKAAYRRLARVCHPDVAAIDQKNSSADEFMKIHAAYSTLSDPDKRANYDRSLFRRQRPLSTAPVFSGYTRRNWETDQCW 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00905 160 SMART dnaj_3 65 125 IPR001623 -
Spst2g00905 160 Gene3D DnaJ domain 57 151 IPR036869 -
Spst2g00905 160 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Spst2g00905 160 CDD DnaJ 68 122 IPR001623 -
Spst2g00905 160 PRINTS DnaJ domain signature 68 86 IPR001623 -
Spst2g00905 160 PRINTS DnaJ domain signature 86 101 IPR001623 -
Spst2g00905 160 PRINTS DnaJ domain signature 105 125 IPR001623 -
Spst2g00905 160 ProSiteProfiles dnaJ domain profile. 66 133 IPR001623 -
Spst2g00905 160 SUPERFAMILY Chaperone J-domain 24 129 IPR036869 -
Spst2g00905 160 Pfam DnaJ domain 67 130 IPR001623 -
Spst2g00905 160 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 17 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00905 Spst-Chr2 7727598 7728080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00905 68 130 C2H2 Transcription Factor Family AT1G74250 41.791 2.87e-08 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00905 2 7727598 7728080 Spst2g00905 2 7727598 7728080 ECH