Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00904 ATGGAGCTAATTAATGCTATACGGAATTGTTTGAATTCGAGCGTGTTACACGTTCTACAACCAACAAATCATGACCTTGATATGGTTCTCCCTATAGCAGTTGAGGATGTTAAGCGTGAAGTCAGGATATTGAAAGAACTAACAGGCCATGAAAATGTGGTTCAGTTCTATAATGCTTTTGAGGATGATTCATACGTGTACATAGTTATGGAGTTATGTGAGGGTGGAGAACTGCTAGATCGGATATTGGCCAAGAAGGACAGTCGTTATACTGAAAAAGATGCAGCTGTGGTCGTAAGGCAGATGCTTAAGGTTGCAGCTGAGTGTCATTTACATGGGTTGGTTCATCGGGACATGAAACCAGAGAACTTTCTTTTCAAATCAACCAGAGGAGATTCACCTTTAAAAGCCACCGATTTTGGGTTGTCTGATTTCATAAAACCTGGAAAGAAGTTTCAAGATATTGTTGGCAGTGCTTACTATGTTGCACCAGAAGTGTTAAAACGGAAGTCAGGTCCAGAGTCAGATGTATGGAGTATTGGTGTGATTACATACATATTGCTTTCTGGGAGGCGCCCATTTTGGGATAAGACTGAGGATGGTATCTTCAAGGAGGTGTTACGAAACAAGCCTGATTTCCGGCGGAAACCATGGCCAACCATAAGCAATGCTGCAAAAGATTTTGTGAAGAAATTGCTGGTAAAAGATCCTCGTGCAAGATATACTGCTGCTCAGGCTCTATCACATCCATGGGTTAAAGAGGGAGGAGAGGCATTGGAGATTCCTATTGACATATCTGTCCTGAACAACATGAGACAGTTTGTGAAGTATAGTCGGTTGAAACAGTTTGCACTAAGGGCATTGGCTAGCACACTTAATGAAGAAGAGTTGTCTGATCTAAAAGATCAGTTTGATGCAATAGACGTGGACAAAAATGGTTCTATTAGTCTTGAAGAGATGAGACAGGCTCTTGCTCAAGATCTCCCTTGGAAGTTGAAAGAATCACGTGTGCTAGAGATATTGCAAGCGATAGACAGCAACACAGATGGGCTAGTGGATTTCACTGAGTTTGTGGCAGCTACATTACATGTACATCAGTTGGAGGAACATGATTCTTTTAAGTGGCAGCAACGATCACAGGCTGCTTTTGAGAAATTTGACTTGGACAAGGATGGCTACATTACTCCAGAAGAACTTAGAATGCATACGGGTTTGAGAGGCTCCATTGATCCATTGCTTGAGGAAGCGGATATAGATAAAGATGGAAAGATCAGTTTACCAGAATTCCGCAGACTTCTAAGAAATGCAAGCATCGGTCGAAACGTGTTGAGCCCGAGTCACCATCATCGAAAGATATAG 1359 0.4202 MELINAIRNCLNSSVLHVLQPTNHDLDMVLPIAVEDVKREVRILKELTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTRGDSPLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLSGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARYTAAQALSHPWVKEGGEALEIPIDISVLNNMRQFVKYSRLKQFALRALASTLNEEELSDLKDQFDAIDVDKNGSISLEEMRQALAQDLPWKLKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEEHDSFKWQQRSQAAFEKFDLDKDGYITPEELRMHTGLRGSIDPLLEEADIDKDGKISLPEFRRLLRNASIGRNVLSPSHHHRKI 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00904 452 CDD STKc_CAMK 25 251 - -
Spst2g00904 452 ProSitePatterns EF-hand calcium-binding domain. 345 357 IPR018247 -
Spst2g00904 452 FunFam Calcium-dependent protein kinase 28 293 362 - -
Spst2g00904 452 PANTHER SERINE/THREONINE-PROTEIN KINASE 32 421 - -
Spst2g00904 452 ProSiteProfiles Protein kinase domain profile. 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00904 452 Gene3D - 273 432 - -
Spst2g00904 452 Gene3D Phosphorylase Kinase; domain 1 20 77 - -
Spst2g00904 452 SUPERFAMILY EF-hand 281 434 IPR011992 -
Spst2g00904 452 ProSiteProfiles EF-hand calcium-binding domain profile. 412 439 IPR002048 GO:0005509
Spst2g00904 452 ProSitePatterns EF-hand calcium-binding domain. 387 399 IPR018247 -
Spst2g00904 452 SMART efh_1 336 364 IPR002048 GO:0005509
Spst2g00904 452 SMART efh_1 408 436 IPR002048 GO:0005509
Spst2g00904 452 SMART efh_1 378 406 IPR002048 GO:0005509
Spst2g00904 452 SMART efh_1 299 327 IPR002048 GO:0005509
Spst2g00904 452 SUPERFAMILY Protein kinase-like (PK-like) 31 272 IPR011009 -
Spst2g00904 452 ProSiteProfiles EF-hand calcium-binding domain profile. 374 409 IPR002048 GO:0005509
Spst2g00904 452 SMART serkin_6 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00904 452 Gene3D Transferase(Phosphotransferase) domain 1 78 272 - -
Spst2g00904 452 Pfam Protein kinase domain 35 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00904 452 Gene3D - 293 362 - -
Spst2g00904 452 ProSitePatterns EF-hand calcium-binding domain. 417 429 IPR018247 -
Spst2g00904 452 Pfam EF-hand domain pair 380 433 IPR002048 GO:0005509
Spst2g00904 452 Pfam EF-hand domain pair 298 361 IPR002048 GO:0005509
Spst2g00904 452 ProSiteProfiles EF-hand calcium-binding domain profile. 332 367 IPR002048 GO:0005509
Spst2g00904 452 ProSitePatterns EF-hand calcium-binding domain. 308 320 IPR018247 -
Spst2g00904 452 ProSiteProfiles EF-hand calcium-binding domain profile. 295 330 IPR002048 GO:0005509
Spst2g00904 452 FunFam calcium-dependent protein kinase 28-like 78 271 - -
Spst2g00904 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00904 Spst-Chr2 7699272 7704134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00904 28 445 EF-hand Containing Proteins AT2G17890 87.112 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst2g00904 Pkinase 1.5e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00904 K13412 - gmx:100817249 809.675