Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00902 ATGGATGGTTTCAGCGGCGATGAAACTGCTCCGTTCTTCGGGTTCCTGGGCGTGGCGGCGGCCCTCGTTTTCTCATGCAGTGGCGTGGGTGTTGCCTCGATGGGCGTGATGAGGTCGGAGTTGGTGATGAAATCGATTGTCCCGGTTGTGATGGCGGCAGTGTTGGGCATCTACGGGGATCTTTTGATAGCTGACCCTAAGGCGAAATCGTATTATCTCTTCGACGGCTACACTCACCTCTCTTCTGTCCTCGCTTGCGGTCTCGCTGGTCTCTCTGCTGGCATGGCCATGGGCATTGTTGGCGACGCCGGTGTTAGGTATCCTATTCTCATTCTCTACTCTCTTATCAATCTCGAACTTATGGAGAAACTCATTTTTATTGAATGTGACATGCTGAGAATGGACACTGTTCTTTGTAAAGCAAATGCTCAGCCACCAAAGCTTTTTGTTGGGATGATTCTGATTCTCATCTTTGTTGAGGCATTGGCGTTCTATGGTCTCATTGTTGGCATCATCCTCTCCTAG 525 0.501 MDGFSGDETAPFFGFLGVAAALVFSCSGVGVASMGVMRSELVMKSIVPVVMAAVLGIYGDLLIADPKAKSYYLFDGYTHLSSVLACGLAGLSAGMAMGIVGDAGVRYPILILYSLINLELMEKLIFIECDMLRMDTVLCKANAQPPKLFVGMILILIFVEALAFYGLIVGIILS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00902 174 PRINTS Vacuolar ATP synthase 16kDa subunit signature 91 117 IPR000245 GO:0033179|GO:0046961|GO:1902600
Spst2g00902 174 PRINTS Vacuolar ATP synthase 16kDa subunit signature 20 44 IPR000245 GO:0033179|GO:0046961|GO:1902600
Spst2g00902 174 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 4 174 - -
Spst2g00902 174 SUPERFAMILY F1F0 ATP synthase subunit C 71 122 IPR035921 -
Spst2g00902 174 Gene3D - 133 174 IPR035921 -
Spst2g00902 174 Gene3D - 10 127 IPR035921 -
Spst2g00902 174 NCBIfam V-type ATPase subunit C 12 105 IPR011555 GO:0033179|GO:0046961|GO:1902600
Spst2g00902 174 CDD ATP-synt_Vo_c_ATP6C_rpt2 73 174 - -
Spst2g00902 174 Pfam ATP synthase subunit C 139 173 IPR002379 GO:0015078|GO:0033177|GO:1902600
Spst2g00902 174 SUPERFAMILY F1F0 ATP synthase subunit C 139 173 IPR035921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00902 Spst-Chr2 7689369 7691408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00902 2 174 Primary Pumps ATPases(2) AT1G75630 67.172 4.55e-73 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00902 K02155 - jre:108991387 193.356