Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00892 ATGCCTGTTCTTTTTCTCCTCGTGGTGTTGTGCGCACCGCTCTTAACGTGCGCCGATCGCAGCGCCGTTACCGTTGTGGAGATCCAAGCCTTGACGTCCTTCAAGCTCAACCTTCATGACCCCGTCGGAGCTCTCGATGATTGGGATCCGTCGTCACCGGCGGCACCGTGCGACTGGCGTGGAGTCGCGTGCACCAATGGCCGAGTCACGGAGCTGCGCCTGCCTCGCCTTCAACTCGGTGGCAGACTCAGTGACCGTGTCTCCGAGTTGCAGATGCTACGCAAGATAAGCCTTCGTTCCAACAACTTCAACGGAACTATTCCTTCGTCGCTCTCCAAATGCACGCTCTTACGGTCATTGTTCCTGCAGGAAAATTCATTTTCCGGCCACCTTCCGACAGAGATAGCGAACCTCACCGGTCTTCAGATTCTCAACGTCGCGCTTAACCACCTCTCCGGCAGCATCCCTGGCCTTCTCCCTCTCGGCCTCAAGTCCCTCGACCTCTCGTCGAACGCGTTCTCCGGCGAGATACCGAGCTCCATAGCGAACCTCTATCAGCTTCAGTTGATAAACCTGTCGTACAACCAGTTCTCCGGCGAGATTCCGGCGAGCCTTGGGGCGCTTCAGCAGCTGCAGTACCTCTGGCTGGACCACAATCTCCTCGGAGGAACGCTTCCTTCGGCGCTCGCTAATTGCTCCTCGCTTCAGCATCTGAGCGTGGAAGGAAACGCGCTTACCGGCGTGATTCCATCGGCGATTTCGGCGCTTCCGAGACTTCAGGTGATTTCCCTCTCTCAGAACAACTTCACCGGTTCCATTCCAGCTTCCGTTTTCTGCCACGGTTCGGTCCACGCGCCGTCGCTGCGGATTGTTCACCTCAGTTTCAACGGTTTCGTGGATTTCGTGGGGCCTGAGATGAGCACGTGTGTAAGTGTTCTTCAGGTTTTGGATATTCAACACAATCGTATACGAGGCACGTTTCCGTTGTGGTTGACTAACGTGACCACGTTGACCGTGCTTGATGTTTCGAACAATGCCCTTTCCGGGGAGGTTCCGCCTCAAATTGGAAACCTCGTTAAATTGGAGGAGTTGAAGATGGCTAATAATTCCTTTACAGGTAGCATTCCGGTGGAACTGAAGAAATGTGGGTTCCTAAACGTCGTTGATTTTGAAGGCAACAAGTTTGACGGAGAAGTTCCTTCGTTTTTGGGTGATATGACGGGGCTGAAGGTGCTTTCTCTCGGCGGGAACCACTTCTCTGGTTCGGTTCCGGTTAGTTTTGGAAACCTTTCATTTCTTGAAACGTTGAGTTTGAGAGGTAATCGGTTAAATGGAAGTATGCCTGAGATGATTATGAGATTGAACAATTTGACGATACTGGACCTAAGCGGAAACAAATTTACGGGTCAAGTTTATACAAGTATTGGGAATTTGAATAATTTGATGGTTCTGAATCTTAGTGGCAATGGCTTCTCTGGAAAAATTCCTGCTAGTTTGGGTAATCTTTTCAAGCTAACTACGCTTGACTTGAGCAAACAGAATCTTTCTGGAGAGTTACCGCTTGAGCTCTCGGGATTGCCGAGTCTGCAAGTTGTTGCACTGCAAGAAAACAAGTTATCCGGTGATGTGCCTGAAGGGTTTAGCAGTTTGACGAGTTTGCAGTATGTGAATCTCAGTTCTAATGTCTTTTCTGGGCATATTCCTGAAAGTTATGGCTTTCTTCGTTCCTTGCTTGTTCTTTCGCTGTCTGATAATCACATTACAGGAGCAATCCCTTCAGAAATTGGAAACTGCTCTGGTGTTGAAATTCTTGAGCTTGGATCAAATTCTCTGGCTGGTCGCATTCCTGTTGATCTCTCTCGCCTCACCCTTTTGAGAGTGCTTGATTTGAGTGGAAACAGTTTAACTGGGGATGTGCCTGAGGAAATCTCCAAATGCTCGTGGTTAACCACTTTGCTGGTGGACCACAATCATCTTTCCGGGGGTATACCTGGGTCCTTGTCGAATCTACGAAACCTAACAATGCTAGATCTCTCTGCTAACAACTTGAGTGGGGAAATTCCAAGCAATCTTTCTATCATTCCCGGTTTAATGTTCTTAAATTTCTCGGGAAATAACTTGGATGGTGAGATACCACCAACGTTGGGATCTCGGTTCAGTAACCCCGATGTATTCGCAGATAATAAGGGTTTGTGTGGTAAGCCATTGGATACGAAATGCGAAGATATAAATCGTAAGGACAGAAAGAGGTTGATAGTGCTTGTGGTTGTCGTTGCTTGTGGAGCTCTTGTACTGGTTTTGTTTTGCTGCTTCTACGTATTTAGTCTATTGAGATGGCGTAAAAGACTGAAAAAAGGAGTATCGGGTGAAAAGAAAAAGAGTCCCGCTAGAGCCAGTTCTGGAACAAGTGGAGGTCGTAGCAGCACTGAGAGTGGGGGACCAAAACTGGTGATGTTCAACACCAAAATTACACTTGCTGAGACCATTGAAGCAACAAGACAGTTCGACGAAGAGAACGTGCTGAGCAGGACAAGGTATGGACTAGTGTTCAAGGCCTGCTATAACGATGGAATGGTCCTCTCCATTCGCAGGCTCCAAGATGGATCATTGGATGAAAACATGTTTAGAAAAGAAGCCGAATCACTGGGGAAAGTGAAGCACCGAAACTTAACTGTTCTCAGAGGTTACTATGCTGGGCCACCCGACATGAGACTCCTAGTCTACGATTACATGCCCAATGGAAACCTCGCAACCCTCCTACAAGAAGCTTCTCATCAAGATGGCCACGTTCTAAATTGGCCAATGCGACACCTCATTGCATTGGGCATTGCCCGTGGTTTAGCCTTCCTACACCAATCCTCAATGGTCCACGGCAACGTAAAACCACAAAATGTCCTATTCGATGCAGATTTCGAAGCCCATTTATCAGATTTCGGGTTAGACAAGTTAACAATAGCAGCAACCCCAGGAGAAGCCTCCACTTCAGCATCTGTTGGCACGTTGGGTTACTTTTCTCCAGAAGCAGTCTTAACCGGGGAAGCCACAAAGGAAAGTGATGTTTACAGCTTTGGCATTGTGTTTTTGGAACTGCTGACTGGAAAACGACCCGTCATGTTCACCCAGGACGAAGACATAGTTAAGTGGGTAAAAAAACAACTGCAAAGGGGTCAAATAACAGAGCTACTAGAACCGGGCTTGCTTGAGTTGGACCCAGAATCATCAGAGTGGGAAGAGTTTTTACTGGGTGTAAAAGTTGGGTTACTTTGCACAGCACCTGACCCTTTTGATCGACCAACCATGGCTGACATTGTTTTCATGCTTGAAGGCTGCCGAGTCGGTCCTGATATCCCATCCTCCGCGGATCCCACCTCTCAACCTTCTCCGGCGTAA 3390 0.4835 MPVLFLLVVLCAPLLTCADRSAVTVVEIQALTSFKLNLHDPVGALDDWDPSSPAAPCDWRGVACTNGRVTELRLPRLQLGGRLSDRVSELQMLRKISLRSNNFNGTIPSSLSKCTLLRSLFLQENSFSGHLPTEIANLTGLQILNVALNHLSGSIPGLLPLGLKSLDLSSNAFSGEIPSSIANLYQLQLINLSYNQFSGEIPASLGALQQLQYLWLDHNLLGGTLPSALANCSSLQHLSVEGNALTGVIPSAISALPRLQVISLSQNNFTGSIPASVFCHGSVHAPSLRIVHLSFNGFVDFVGPEMSTCVSVLQVLDIQHNRIRGTFPLWLTNVTTLTVLDVSNNALSGEVPPQIGNLVKLEELKMANNSFTGSIPVELKKCGFLNVVDFEGNKFDGEVPSFLGDMTGLKVLSLGGNHFSGSVPVSFGNLSFLETLSLRGNRLNGSMPEMIMRLNNLTILDLSGNKFTGQVYTSIGNLNNLMVLNLSGNGFSGKIPASLGNLFKLTTLDLSKQNLSGELPLELSGLPSLQVVALQENKLSGDVPEGFSSLTSLQYVNLSSNVFSGHIPESYGFLRSLLVLSLSDNHITGAIPSEIGNCSGVEILELGSNSLAGRIPVDLSRLTLLRVLDLSGNSLTGDVPEEISKCSWLTTLLVDHNHLSGGIPGSLSNLRNLTMLDLSANNLSGEIPSNLSIIPGLMFLNFSGNNLDGEIPPTLGSRFSNPDVFADNKGLCGKPLDTKCEDINRKDRKRLIVLVVVVACGALVLVLFCCFYVFSLLRWRKRLKKGVSGEKKKSPARASSGTSGGRSSTESGGPKLVMFNTKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLQDGSLDENMFRKEAESLGKVKHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSMVHGNVKPQNVLFDADFEAHLSDFGLDKLTIAATPGEASTSASVGTLGYFSPEAVLTGEATKESDVYSFGIVFLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPFDRPTMADIVFMLEGCRVGPDIPSSADPTSQPSPA 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00892 1129 SMART LRR_typ_2 526 549 IPR003591 -
Spst2g00892 1129 SMART LRR_typ_2 430 453 IPR003591 -
Spst2g00892 1129 SMART LRR_typ_2 90 114 IPR003591 -
Spst2g00892 1129 SMART LRR_typ_2 478 502 IPR003591 -
Spst2g00892 1129 SMART LRR_typ_2 574 598 IPR003591 -
Spst2g00892 1129 SMART LRR_typ_2 334 358 IPR003591 -
Spst2g00892 1129 SMART LRR_typ_2 454 477 IPR003591 -
Spst2g00892 1129 SMART LRR_typ_2 256 280 IPR003591 -
Spst2g00892 1129 SMART LRR_typ_2 670 701 IPR003591 -
Spst2g00892 1129 SMART LRR_typ_2 622 646 IPR003591 -
Spst2g00892 1129 SMART LRR_typ_2 406 429 IPR003591 -
Spst2g00892 1129 SMART LRR_typ_2 208 232 IPR003591 -
Spst2g00892 1129 Gene3D Ribonuclease Inhibitor 26 160 IPR032675 -
Spst2g00892 1129 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 617 740 - -
Spst2g00892 1129 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Spst2g00892 1129 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 182 - -
Spst2g00892 1129 Pfam Leucine rich repeat 163 221 IPR001611 GO:0005515
Spst2g00892 1129 Pfam Leucine rich repeat 408 467 IPR001611 GO:0005515
Spst2g00892 1129 Pfam Leucine rich repeat 313 370 IPR001611 GO:0005515
Spst2g00892 1129 Pfam Leucine rich repeat 576 635 IPR001611 GO:0005515
Spst2g00892 1129 SUPERFAMILY L domain-like 307 592 - -
Spst2g00892 1129 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 185 248 - -
Spst2g00892 1129 Gene3D Ribonuclease Inhibitor 161 247 IPR032675 -
Spst2g00892 1129 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 473 567 - -
Spst2g00892 1129 MobiDBLite consensus disorder prediction 790 815 - -
Spst2g00892 1129 SUPERFAMILY Protein kinase-like (PK-like) 815 1117 IPR011009 -
Spst2g00892 1129 SUPERFAMILY L domain-like 533 717 - -
Spst2g00892 1129 Gene3D Ribonuclease Inhibitor 452 744 IPR032675 -
Spst2g00892 1129 PANTHER OS04G0122200 PROTEIN 492 1094 - -
Spst2g00892 1129 MobiDBLite consensus disorder prediction 795 815 - -
Spst2g00892 1129 Pfam Protein kinase domain 845 1103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00892 1129 Gene3D Transferase(Phosphotransferase) domain 1 911 1115 - -
Spst2g00892 1129 FunFam Uncharacterized protein 256 472 - -
Spst2g00892 1129 Gene3D Phosphorylase Kinase; domain 1 806 910 - -
Spst2g00892 1129 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 911 1115 - -
Spst2g00892 1129 ProSiteProfiles Protein kinase domain profile. 835 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00892 1129 FunFam Putative LRR receptor-like serine/threonine-protein kinase 798 910 - -
Spst2g00892 1129 Pfam Leucine Rich Repeat 480 502 IPR001611 GO:0005515
Spst2g00892 1129 SMART LRR_sd22_2 670 693 - -
Spst2g00892 1129 SMART LRR_sd22_2 208 234 - -
Spst2g00892 1129 SMART LRR_sd22_2 622 645 - -
Spst2g00892 1129 SMART LRR_sd22_2 160 186 - -
Spst2g00892 1129 SMART LRR_sd22_2 454 480 - -
Spst2g00892 1129 SMART LRR_sd22_2 334 360 - -
Spst2g00892 1129 Gene3D Ribonuclease Inhibitor 350 451 IPR032675 -
Spst2g00892 1129 Gene3D Ribonuclease Inhibitor 248 349 IPR032675 -
Spst2g00892 1129 SUPERFAMILY L domain-like 26 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00892 Spst-Chr2 7602179 7605568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00892 3 1129 Receptor kinase-like Gene Family AT4G36180 69.156 0.0 1505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Spst2g00892 Pkinase 9.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00892 - - gmx:100795838 1917.89