Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00871 ATGCAAGAAGTACATGTGAGCGATGAAGAGGAGAACATGGAACTGAAGAGGTTGAAGGCTAATTGCACAGAAGATTACGCATGGACCGATTACATGTCACTGCCATTTACTCAAAATGTTATCAGTGAAACTCTTAGAATGGCCAATATTGTCAATGGCATTTGGAGGAAATCTGTCAATGACATAGAAATTAAAGGGTACCTAATTCCGAAGCACTGGTGTGTCATGGCATCTCTTACCTCTAAAATTGGAGTTGTGGCGGGTAACAACTGCTTCACACCATTTGGCGGTGGAAATAGACTATGCCCTGGATTAGAACTCTCCAGGCTAGAGCTCTCTATTTTCCTTCACCATATTGTTACTACTTACAGATGGGTGGCTGAGAGGGATGAAATAATCTACTTTCCAACTGTCAAAATGAAGAAGAAGCTCCCAATTAGCGTGCAACCCATTAACGCTTGA 462 0.4199 MQEVHVSDEEENMELKRLKANCTEDYAWTDYMSLPFTQNVISETLRMANIVNGIWRKSVNDIEIKGYLIPKHWCVMASLTSKIGVVAGNNCFTPFGGGNRLCPGLELSRLELSIFLHHIVTTYRWVAERDEIIYFPTVKMKKKLPISVQPINA 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00871 153 Gene3D Cytochrome P450 8 83 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00871 153 Gene3D Cytochrome P450 84 151 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00871 153 SUPERFAMILY Cytochrome P450 21 149 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00871 153 PRINTS P450 superfamily signature 39 50 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00871 153 PRINTS P450 superfamily signature 102 113 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00871 153 PRINTS P450 superfamily signature 93 102 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00871 153 PANTHER CYTOCHROME P450 26 12 133 - -
Spst2g00871 153 Pfam Cytochrome P450 92 128 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00871 153 Pfam Cytochrome P450 25 80 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00871 153 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 95 104 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00871 Spst-Chr2 7355771 7360339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00871 9 149 Cytochrome P450 AT5G05690 42.945 1.95e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00871 K12637 - gmx:100799030 281.567