Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00860 ATGATACATCTGATTGGAATGGAACGGAACAACAACCTTGAATTTCGCCTAAAGTTGTTCCCGAACCCCTGCTCTGTCTCCATTACGGATTTAGATTACCCTCCTCTCCTCTATAACCTCTATTTCTTCGTCCCTGCTTTTCTTCTCTTTCAAGAGGCAGGGCACCCTGAGGAAGCAATCAACGTAAACGACGTCATGTCTGGTACTGTGTCTCCCAAAACAGGTTCTTTCAAGCAAAAGGCACTGAATGCCTCAAACATGCTGAGGAATTCTTTGACAAAAAAGGGTAGGCGAAGCAGCAAGGTCATGTCTGTTGAAATTGAGGATGTCCACGATGCTGAGGAGTTGAAAATAGTTGATGAGTTCCGTCAAGCTCTTATTTTGGACGAACTTCTCCCCGCAAAACACGATGATTATCACATGATGCTTAGATTCCTGAAGGCCAGGAAGTTCGATATTGAGAAAACAAAGCAAATGTGGTCTGACATGCTCAAATGGAGGAAGGAGTTTGGTGCTGACACTATTGAGGAGGACTTTGATTTCAAAGAAATTGATGAGGTCTTACAATATTATCCCCAAGGACATCATGGAGTGGACAAAGAGGGAAGACCTGTGTATATAGAGAGATTAGGCCAAGTCGACGCCGGGAAAATGATGCAAGTCACCACCATGGATCGCTATATCAAATACCATGTAAAGGAGTTTGAGAGGACATTCGATGTAAAGTTTGCAGCTTGTTCAATTGCTGCAAAGAAGCACATTGATCAAAGTACAACTATCCTGGATGTGCAGGGAGTGGGGCTCAAAAGCTTCAACAAGCATGCTAGGGAACTCGTTACTCGTCTTCAGAAGATTGACGGTGACAACTATCCAGAGACCTTGAACCGCATGTTCATCATCAATGCAGGCTCTGGATTCAGAATACTCTGGAACACCGTAAAATCATTCCTTGACCCTAAGACTACGGCAAAAATCAATGTTCTTGGCAACAAGTATGACACCAAATTGCTAGAAATAATTGATGCAAGTGAGTTGCCTGACTTTTTGGGAGGTACTTGTACTTGTGCTGATAAGGGAGGTTGTATGCGCTCTGATAAGGGCCCGTGGAAGGATCCAGAAATATTGAAGATGGTTCAGAGTGGCGCTCACAAATGCTCAAAAAAAGGTGACTCACACGGCGAGGAGGAGAAAGCAATTCCTGAGGAACCCGAGACTCCCAAGTCTGAGGCAACTCCCGCCCCCGTTGTTGAAGAGGTCCCTGCCACTTCACCCTCCAAGCCTGCGGTTGACACAACTTTGAAAAATGCTGACGAGGAACCTACCAAGCCTAAGGACGTATCCCCTGGGGTTGACTCAACTGCACCAGCAGCAGCAATATCATCAACAGAGCTTGCGACTGTGATGAAGCGCATGGCTGAGTTGGAGAATAAAATGGTCACCATTAACAAGCAGCCTGCTTCCATGCCACCTGAGAAGGAGGAAATGCTGAATGCAACTATGACTCGAGCTGATGACTTGGAGAAGCAACTTTTGGAGACAAAGAAGGCTCTGGAAGATTCACTTGTTCGACAAGAAGAACTTTCGGCTTACATTGAGAAAAAGAAGAAGAAGAAGAAGAAATTTGTATCCAAGTTCTTCACTATAAATACCATACCCCATCATAATGCTCAACCAATCCAGCTAGAAAACTCCTCTTCAACCACCCTTGTGCAATTGTTGTTCAGGGAACTGCTCTTGAAAGGAACAACAATGGTCAATTCTGTAAACTTTCTCCTGCTTTTTTCTCTACTAACCTTGGCTCCCTTCTGTCACTGTAAAAAGAAAAATGCAGGTTACCTTTACCCTCAATTTTACGACGGTTCATGCCCCAGAGCTGAAGAGATTGTCCAATCCGTTGTTGCCAAGGCTGTGTCCAAAGAACCCCGCATGGCTGCTTCATTGCTGAGGCTGCATTTCCATGATTGTTTTGTCAAGGGGTGTGATGCATCAGTGTTGCTAGACAGCAGTGGAACTATTATCAGTGAAAAGAGGTCAAATCCAAACCGAGATTCAGCTCGAGGATTTGAAGTTATTGATGAAATTAAATCCGCACTAGAGAAAGAATGCCCACGTACAGTGTCATGTGCTGACATTTTGGCTCTAGCTGCTAGGGATTCGACTGTTCTTACAGGTGGACCAAGCTGGGAAGTACCTTTGGGGAGAAGGGACTCTCTAGGTGCAAGCATCAGTGGCTCAAATAACAATATTCCTGCTCCCAACAACACATTCCAGACCATCCTAACTAAGTTCAAGCTTAAGGGACTTGACATTGTTGATCTAGTTGCTCTATCCGGGAGCCACACTATAGGAGATTCCCGATGCACCAGCTTCAGGCAGAGACTCTACAACCAAACTGGCAATGGAAAAGCAGACTTCACTCTTGATCAACAGTATGCTGCTGAATTGCGAACTCGGTGTCCAAGATCTGGCGGGGACCAGAATCTGTTTGTCCTAGACTTTGTTACCCCACTTAAATTTGACAACTTGTATTACAATAACTTGTTGGCTAACAAGGGTCTGTTAAGTTCTGACGAAGTTCTCTTGACAAAGAATCAAGAATCTGCGGATTTGGTGAGGAAGTATGCAGAGAGAAACGACCTATTCTTTCAACAATTTGCCAAGTCCATGGTTAAGATGGGAAACATTACTCCTCTAACAGGATCCAGGGGAGAGATCAGAAAAAACTGCAGAAAAATTAACAAGTGA 2745 0.4448 MIHLIGMERNNNLEFRLKLFPNPCSVSITDLDYPPLLYNLYFFVPAFLLFQEAGHPEEAINVNDVMSGTVSPKTGSFKQKALNASNMLRNSLTKKGRRSSKVMSVEIEDVHDAEELKIVDEFRQALILDELLPAKHDDYHMMLRFLKARKFDIEKTKQMWSDMLKWRKEFGADTIEEDFDFKEIDEVLQYYPQGHHGVDKEGRPVYIERLGQVDAGKMMQVTTMDRYIKYHVKEFERTFDVKFAACSIAAKKHIDQSTTILDVQGVGLKSFNKHARELVTRLQKIDGDNYPETLNRMFIINAGSGFRILWNTVKSFLDPKTTAKINVLGNKYDTKLLEIIDASELPDFLGGTCTCADKGGCMRSDKGPWKDPEILKMVQSGAHKCSKKGDSHGEEEKAIPEEPETPKSEATPAPVVEEVPATSPSKPAVDTTLKNADEEPTKPKDVSPGVDSTAPAAAISSTELATVMKRMAELENKMVTINKQPASMPPEKEEMLNATMTRADDLEKQLLETKKALEDSLVRQEELSAYIEKKKKKKKKFVSKFFTINTIPHHNAQPIQLENSSSTTLVQLLFRELLLKGTTMVNSVNFLLLFSLLTLAPFCHCKKKNAGYLYPQFYDGSCPRAEEIVQSVVAKAVSKEPRMAASLLRLHFHDCFVKGCDASVLLDSSGTIISEKRSNPNRDSARGFEVIDEIKSALEKECPRTVSCADILALAARDSTVLTGGPSWEVPLGRRDSLGASISGSNNNIPAPNNTFQTILTKFKLKGLDIVDLVALSGSHTIGDSRCTSFRQRLYNQTGNGKADFTLDQQYAAELRTRCPRSGGDQNLFVLDFVTPLKFDNLYYNNLLANKGLLSSDEVLLTKNQESADLVRKYAERNDLFFQQFAKSMVKMGNITPLTGSRGEIRKNCRKINK 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00860 914 Gene3D - 83 170 - -
Spst2g00860 914 ProSitePatterns Peroxidases active site signature. 644 655 IPR019794 GO:0004601
Spst2g00860 914 MobiDBLite consensus disorder prediction 383 404 - -
Spst2g00860 914 Gene3D - 617 913 - -
Spst2g00860 914 ProSiteProfiles Plant heme peroxidase family profile. 612 913 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst2g00860 914 Gene3D - 171 382 IPR036865 -
Spst2g00860 914 PRINTS Haem peroxidase superfamily signature 644 658 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst2g00860 914 PRINTS Haem peroxidase superfamily signature 832 847 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst2g00860 914 PRINTS Haem peroxidase superfamily signature 706 723 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst2g00860 914 PRINTS Haem peroxidase superfamily signature 772 787 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst2g00860 914 PRINTS Haem peroxidase superfamily signature 724 736 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst2g00860 914 SUPERFAMILY CRAL/TRIO domain 183 379 IPR036865 -
Spst2g00860 914 Pfam CRAL/TRIO, N-terminal domain 135 162 IPR011074 -
Spst2g00860 914 SUPERFAMILY Heme-dependent peroxidases 613 913 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst2g00860 914 Coils Coil 464 484 - -
Spst2g00860 914 CDD secretory_peroxidase 613 912 IPR033905 GO:0004601|GO:0042744
Spst2g00860 914 FunFam Peroxidase 616 757 - -
Spst2g00860 914 Pfam CRAL/TRIO domain 189 351 IPR001251 -
Spst2g00860 914 SMART CRAL_TRIO_N_2 138 163 IPR011074 -
Spst2g00860 914 FunFam Peroxidase 750 892 - -
Spst2g00860 914 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 183 357 IPR001251 -
Spst2g00860 914 CDD SEC14 184 352 IPR001251 -
Spst2g00860 914 Pfam Peroxidase 629 876 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst2g00860 914 Coils Coil 496 527 - -
Spst2g00860 914 SUPERFAMILY CRAL/TRIO N-terminal domain 112 178 IPR036273 -
Spst2g00860 914 SMART sec14_4 183 354 IPR001251 -
Spst2g00860 914 ProSitePatterns Peroxidases proximal heme-ligand signature. 772 782 IPR019793 -
Spst2g00860 914 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 73 535 - -
Spst2g00860 914 Gene3D Peroxidase, domain 2 750 893 - -
Spst2g00860 914 MobiDBLite consensus disorder prediction 381 454 - -
Spst2g00860 914 FunFam SEC14 cytosolic factor 171 383 - -
Spst2g00860 914 PRINTS Plant peroxidase signature 846 863 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst2g00860 914 PRINTS Plant peroxidase signature 771 783 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst2g00860 914 PRINTS Plant peroxidase signature 830 845 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst2g00860 914 PRINTS Plant peroxidase signature 887 900 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst2g00860 914 PRINTS Plant peroxidase signature 622 641 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst2g00860 914 PRINTS Plant peroxidase signature 646 666 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst2g00860 914 PRINTS Plant peroxidase signature 686 699 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst2g00860 914 PRINTS Plant peroxidase signature 705 715 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst2g00860 914 PRINTS Plant peroxidase signature 724 739 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00860 Spst-Chr2 7250098 7260496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00860 584 913 Peroxidase AT5G66390 74.775 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00860 K26544 - gmx:100796901 770