Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00839 ATGGATCAGTCAACACCTTACTATAACCCATTTCCTCAGACTTCAAACTCAACTAGGAAGGGACGGAGTGGTTATGAGCCATCGGACACAGAGACTGAATGGCAGGAGATTCCACGCCACGAACGAGAAAGAAGAAACTTAACGTTAGAAGAAACTAAAGCACGCACTCTAATGAACAAAAGCCCCATGGCACTACACAGGAGGCACCCTTCGAGGATTGAACATGAAACATCATCGGCTTCAACAAATCCAGTTCCACGGAGAAGACACAATAGCAAATCACCCTATAAGCTGCGCGTACCAGAAGATGTTGCTGCTTCATCATCCCCCATAACTGGTTTGAATAATCGCAGAAATGTCAGTCCTTTGCCGAGACCTGAACTTGGAAGAAACGTGTCTCCTTTCAGAGAGCAAAGAACTGAGAAGCCGCACTACAAGAGATCAGTGACTGCTCCGAGATTGAGGATTCAAGAGAGCAACCCTGGAGGCAGAATCAATGACATGGTTCTGAAACAAAGAGAAGTTTCTCCTTTCAAAGCGCCTTTGGTTGGAGAAATCAACGACATGATAGCACAGGTGAAGCTATCTAAAGACTCCACTAGTGATTATTCGTCAGTGCTTGAAAGCACTGATTCCATTAAACCGGGTGACCTTTTCTTTTCTCGTGAATGCAATGCCTTCCAAGGGGGGAATTCTTCGTTGCCAAAACGCATCCAACAGTGTGAGTATTTCAGTCCAAGGCCTACGGTGAACTCCACGAGAACCCCATCTGAGGGTAAAGGAAATAATGGTGATCTTAACATGAATATGAATATCTTGTCCCGATCAACCACGGGTTTGAGCTCTGCTGCTACGAGTAGAAAGGGCAGTGGCACTGGGAAGCCAAGTAGTGTAACAAGCGAAGGTAGTGGAAAAACAACTGCAAGCATGAGGAAATTCACAGCCAACAGAAAAAAGAACCAGAAAGATACATGGTTTTCTTGCATGAGAACAGGCAACTGTAGAACCTCTAGAAAATCGCCTGAACGTCGACCCATTGACGAAACTTCTTTCATTGAGAGAGCAGTGGTAGTGGAAAGCCTTCCACAGTTCTTGGCAGATAAACACCAACCTGCTTCATTTAATGGCTTCATTTGCAACAGACAAGAAGCTCAGCTTCTCAAGGATTTGGTGTCTCATGGGTCTTGTCCTCATATTTTGCTGAAAGGACCCCCTGGTTCCGGGAAAAGAGAACTAGCAATGGCTCTTCTTCGAGAAATATATGGTGATGCATGTTGTAATCTGTCTCATGATTTAAGACACTTCCCTATTCAGGACCAAAGGCTTAAGAAAGTATTTGTCCCAATAACATCCAGTCCTCATCACATGGAACTAGATGTAAATTCAGAACCAAATGCTAAATATGCTTTAATGGGATTAATCAAAGAAATTAGCAATATATATGCGATTGCCCCTGAAGTCAGCAATATTAATTTCAAGTCAGATTTTAAAGTAATAGTTCTTTACGAGGTCGACAAAGCAGTAGATAATATCCAGCACATTGTCAAATGGATCATAGACCGCTATTCTGATATATGCAAATTAGTAATCTGCTGTGAAGATGATGCAGACATTATTGAACCTGTCAAAAACCGGTTCAAAATTATCCCAGTTGATCTTCCTCAAATTCATGAAATTGTTGAGGTTCTTACGCAGATAGCAAAGATTGAGAACATAGATTTGTCCATGAACTTTGCTGCAAAAATTGCTACAAAATCTAAGCAGAACCTCAGAAAAGCAATCATGGCTCTTGAAGCGTGCAAAGCACACAACTATCCATTTTCAGAAGAACAACCGATTTCAGTGCCGAAATTGATTCTCCAGAAACTCGTAGAACACCTCCTTAAAAGAATTGACGCCAGCTTAAAAAGGGAGCTATACTACTGGCATGCTTATTATGAGAGAAGACTCCCACCAGGAATAACAGCTTTAATAAAGTTAGAAGAATTTGTGGCCAAGTTCATGAGCACATACAGAAAAAGCTCTGGCAGTAGGCAATATGTGTAG 2046 0.4208 MDQSTPYYNPFPQTSNSTRKGRSGYEPSDTETEWQEIPRHERERRNLTLEETKARTLMNKSPMALHRRHPSRIEHETSSASTNPVPRRRHNSKSPYKLRVPEDVAASSSPITGLNNRRNVSPLPRPELGRNVSPFREQRTEKPHYKRSVTAPRLRIQESNPGGRINDMVLKQREVSPFKAPLVGEINDMIAQVKLSKDSTSDYSSVLESTDSIKPGDLFFSRECNAFQGGNSSLPKRIQQCEYFSPRPTVNSTRTPSEGKGNNGDLNMNMNILSRSTTGLSSAATSRKGSGTGKPSSVTSEGSGKTTASMRKFTANRKKNQKDTWFSCMRTGNCRTSRKSPERRPIDETSFIERAVVVESLPQFLADKHQPASFNGFICNRQEAQLLKDLVSHGSCPHILLKGPPGSGKRELAMALLREIYGDACCNLSHDLRHFPIQDQRLKKVFVPITSSPHHMELDVNSEPNAKYALMGLIKEISNIYAIAPEVSNINFKSDFKVIVLYEVDKAVDNIQHIVKWIIDRYSDICKLVICCEDDADIIEPVKNRFKIIPVDLPQIHEIVEVLTQIAKIENIDLSMNFAAKIATKSKQNLRKAIMALEACKAHNYPFSEEQPISVPKLILQKLVEHLLKRIDASLKRELYYWHAYYERRLPPGITALIKLEEFVAKFMSTYRKSSGSRQYV 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00839 681 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 366 614 - -
Spst2g00839 681 SUPERFAMILY post-AAA+ oligomerization domain-like 616 671 IPR008921 GO:0003677|GO:0006260
Spst2g00839 681 MobiDBLite consensus disorder prediction 132 146 - -
Spst2g00839 681 FunFam replication factor C subunit 3 555 613 - -
Spst2g00839 681 Gene3D - 613 671 - -
Spst2g00839 681 MobiDBLite consensus disorder prediction 246 310 - -
Spst2g00839 681 MobiDBLite consensus disorder prediction 24 51 - -
Spst2g00839 681 Gene3D - 556 612 - -
Spst2g00839 681 MobiDBLite consensus disorder prediction 1 146 - -
Spst2g00839 681 MobiDBLite consensus disorder prediction 1 23 - -
Spst2g00839 681 Gene3D - 363 554 IPR027417 -
Spst2g00839 681 FunFam Replication factor C subunit 3 363 554 - -
Spst2g00839 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 608 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00839 Spst-Chr2 7086001 7089865 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00839 364 672 Core DNA Replication Machinery Family AT5G27740 34.571 7.57e-59 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00839 K10756 - gmx:100795321 1157.13