Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00797 ATGGGTCCAGGTGGTGGAGGGTGGGGTCCACCACCACCTCCTCCGATGATGAATAGTGCTGAAATGAGCTCCAACTATTCGACGGGACCACCCTTGCCTCCTCCCTCACCAAACCTTGCTCTAGGCCTCAAAGGTGGCACCTTCAGTTTGGAGGAACTGGCAGCTGCCACCAATGGATTCGCTGATGTAAATCTTATAGGACAAGGTGGCTTCGGTTATGTCCACAAGGGGGTGTTGCCTAATGGAAAGGAAGTGGCAGTTAAGAGTCTAAAAGCAGGAAGTGGACAGGGAGAACGAGAGTTCCAAGCTGAGATTGACATCATTAGTCGTGTCCATCATCGCCATCTTGTGTCACTCGTTGGATACTCTATTTCTGGTGGCCAGAGAATGTTGGTCTATGAATTTATTCCCAATAAAACATTGGAATATCACCTTCATGGAAAGGGCACGCCTACAATGGATTGGCCTACTAGAATGCGAATTGCAATAGGATCAGCCAAAGGGCTTGCTTATCTTCATGAAGATTGTCATCCTCGCATAATCCATCGTGATATTAAAGCTGCGAATGTCCTCATTGATGATAGCTTCGAAGCAAAGGTTGCTGATTTTGGATTGGCTAAGTTGACTACTGATAATAATACTCATGTATCGACTCGTGTGATGGGAACTTTCGGGTACCTAGCCCCAGAATATGCATCAAGTGGAAAACTGACTGAGAAGTCTGATGTTTTCTCGTTTGGGGTCATGCTATTAGAACTCATAACTGGAAAGCGACCTGTGGATCACACAAGTGCAATGGATGACAGCTTAGTAGATTGGGCTCGACCTCTACTGAATCGTGGATTGGAAGAGGATGGCAACTTTGGAGAGTTGATTGATCCCTTCTTGGAGGGAAACTACAATGCTCAAGAATTGTCAAGGATGGCAGCTTGTGCTGCTGGTAGCATTCGTCATTCTTCCAAAAAACGTCCAAAAATGAGCCAGATTGTAAGAATATTGGAGGGAGATGTGTCACTGGATGACTTGAAAGATGGGATAAAGGCAGGGCAAAGTACTGTTTACAATTCTTCATCTGGATCAGAGCAGTATGATACAAAGCAATACAATGCTGACTTACAAAAGTTTAGAAAGGCGGTGTTTTCTAATAGCCAGGAATTTGGCAGCAGTGATGGCTCTAGTGGTGAAGTGAACCAAAAGCTACGGCATTAG 1209 0.4524 MGPGGGGWGPPPPPPMMNSAEMSSNYSTGPPLPPPSPNLALGLKGGTFSLEELAAATNGFADVNLIGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYSISGGQRMLVYEFIPNKTLEYHLHGKGTPTMDWPTRMRIAIGSAKGLAYLHEDCHPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDHTSAMDDSLVDWARPLLNRGLEEDGNFGELIDPFLEGNYNAQELSRMAACAAGSIRHSSKKRPKMSQIVRILEGDVSLDDLKDGIKAGQSTVYNSSSGSEQYDTKQYNADLQKFRKAVFSNSQEFGSSDGSSGEVNQKLRH 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00797 402 FunFam Proline-rich receptor-like protein kinase PERK1 136 344 - -
Spst2g00797 402 MobiDBLite consensus disorder prediction 1 33 - -
Spst2g00797 402 MobiDBLite consensus disorder prediction 1 18 - -
Spst2g00797 402 SUPERFAMILY Protein kinase-like (PK-like) 40 333 IPR011009 -
Spst2g00797 402 Pfam Protein tyrosine and serine/threonine kinase 65 265 IPR001245 GO:0004672|GO:0006468
Spst2g00797 402 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 44 379 IPR047117 -
Spst2g00797 402 ProSiteProfiles Protein kinase domain profile. 60 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00797 402 FunFam proline-rich receptor-like protein kinase PERK1 38 135 - -
Spst2g00797 402 Gene3D Transferase(Phosphotransferase) domain 1 136 348 - -
Spst2g00797 402 Gene3D Phosphorylase Kinase; domain 1 40 135 - -
Spst2g00797 402 ProSitePatterns Protein kinases ATP-binding region signature. 66 88 IPR017441 GO:0005524
Spst2g00797 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Spst2g00797 402 SMART serkin_6 60 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00797 Spst-Chr2 6727743 6730140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00797 36 380 Trihelix Transcription Factor Family AT1G70460 60.519 1.45e-147 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Spst2g00797 PK_Tyr_Ser-Thr 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00797 - - gmx:100777163 709.909