Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00794 ATGCAATGTTTGTGGTATGACAACTCATTTCTGAAGAGAGTTACTCTTCCTTCACTCTGCTTCATCACTTCACTCCTCTCATCTCCTTCATCACCCCACTCCTCTCATTCCTTCTCCTTTGATCAATCTTTTAAACAACAGGGAAGGTCAGCAAAAGATGCTACTAGAAGAACTCTGAAGACCAAGATTAAAGTGTTGACAGATCAATTCCATGCCGAGAGAGGGGAATCAGTTAAAGAGAAAGTTCAAAGACACTGGAGAAACCTTGAGCCTTTTTTTCCAACGGTTAAGACTGTATTATCAGGGAATGAGTATTTGCAGGCTGGGGAAAACGTCAATATGCTGTCTTTGAGAATTGACCACCCTATATGTAAACTCATTGGGTTCCATGAAGCTACATTAGAGGAGGATCAGATCAATAATGTGGACATATCATCAGCAGATAGTGTTAGGATTCCAAAGAAGGAAAGATTACCACCATATACGTCTTGGGTATATGTGGCCAGAATAAATGATGTTGGTCAACCGGAATTTTTTGTTAAGTGGCCACAACTATCAGAAGTTGAAAGTTGCCGGGAGAAGTTTCTGAAAATGTTCTGCAGTTCCACCTTGAGGACAAGATGCATCTTAATGGGGAGAAATGAGAAAATGGACGAAGAACAATCAGTTATCGGAAAATACCAAATGTACTATGATCAAAGTAGAGGTGAAATGATGATATGCAGTGATAATGAGGAGGAGAAGCCAGAAACCAAGGAAGTCAAGCATGAATTCACCGAGGCTGAAGACCAAATCTTGAGGATGACACTCGAGGAATATGGGTCTACTAAGGAGGTATTGAGTATCATTAAAGATATTTTTGAGACGAATGCTTCCCAAATTCAGGAGAGGTATGAAAAACTAAAGGAAAAGAATATGGAGAGTCTGGATCAAAATTCTAAAGATTGTCATTGTAAAGGATGTGAAAATCATCTTGGAATATGTTTGGAGAAAAGTTTGAGTGGGACTTTAGAAACTTTTGATAAACTCTTCTGTCGTCGATGTTTGGATAAAAGTGTTACACCAATGGAAGAGGACTCCACATTGCCTCCTAATGAGGCTCAGAGTTCTTGTAAGCTGAATAGAATCTCAGATGATACCATTATCAAAATTGGGAATCAGTACAGTGAACTAAATTTGGATGCTGGTGACAAAGAAAACCACACAACATGTCGTGCATCTTTGAAAGATCTTGTTGAGCATGCTTCAGAGAAATTGTCAGTTTCTGGTAGCTTTGACCACAGTGAGCAGGACAAAGGAGTTATGAGTGAACAAACAGATCTTATGAAGGAGATAGAATTTAATGAGATGTCCATTTCAAGGGAAGTGCAAGCTGATGAGATGATAAGTGAATCAGATTGGAGACCACTTGAGAGAGATTTATATTTGAAGGGAGTAGAAATCTTTGGAAAAAATAGTTGCCTTATAGCCACTACCTTACTTCCTGGCTTGAAGACTTGCTCTCAAGTAGCTAAGTATATGTTTGCTGGTGGAGAGTCAGTGTTCCATGCATCCACTTCAAATTCAATCATGGATAGAAATGAAAGGACCAATGCAGAGTGCACAGACCTAGAAGTGGCATCAACAAGATTGAGGTCACAACGGAAAAAGTGCAAACCTAAGAAGTTCAACTATATTCGAAAGTCTGCTGGTCTCCCACCTAGGAATGCTCTTGTCTTCTTAATGGAACTTGCTGTGAAAAATATTGTGGGTGTTCAAAGCAATGCAAAAATCGATTCAGAGGGTGTCATTGTACTAAGAGTCAATGCAGAAGTCGATTATGTCCGTGCTTTGCAGCCAATCGTGAATGTGACCCAGATGTCTGTCGAAATTGTTGGATTAGGAGAGTACACGGGTGAACTAATCCCTCCTGAAGAAGCAGAAAAACGTGGGAAACTATATGATCGTATCGACACTTCCTTCCTTTTTAACCTCAATAATGAGGCAAGTTGGGTTATTGATGCTCGTCGCCTTGGAGACAAACTAAAATTTGCGAACCATTCATCAAAACCCAACTGCTATGCAAAGGTGATGCTTGTTGGAGGAGATCATCGAGTCGGCATATTTGCCAAGGAAAACATTCAAGCTGGTGATGAGATTTTTTATGACTATTGGTATGATCTAGATTGTGCACCATCATGGGCTCTTCCACCTGAAGACAGTGCTTCCAGAAGAGATGAATTAGTCACTTCTCAAAGCAAGGCAAAGAAACGTTAG 2256 0.4007 MQCLWYDNSFLKRVTLPSLCFITSLLSSPSSPHSSHSFSFDQSFKQQGRSAKDATRRTLKTKIKVLTDQFHAERGESVKEKVQRHWRNLEPFFPTVKTVLSGNEYLQAGENVNMLSLRIDHPICKLIGFHEATLEEDQINNVDISSADSVRIPKKERLPPYTSWVYVARINDVGQPEFFVKWPQLSEVESCREKFLKMFCSSTLRTRCILMGRNEKMDEEQSVIGKYQMYYDQSRGEMMICSDNEEEKPETKEVKHEFTEAEDQILRMTLEEYGSTKEVLSIIKDIFETNASQIQERYEKLKEKNMESLDQNSKDCHCKGCENHLGICLEKSLSGTLETFDKLFCRRCLDKSVTPMEEDSTLPPNEAQSSCKLNRISDDTIIKIGNQYSELNLDAGDKENHTTCRASLKDLVEHASEKLSVSGSFDHSEQDKGVMSEQTDLMKEIEFNEMSISREVQADEMISESDWRPLERDLYLKGVEIFGKNSCLIATTLLPGLKTCSQVAKYMFAGGESVFHASTSNSIMDRNERTNAECTDLEVASTRLRSQRKKCKPKKFNYIRKSAGLPPRNALVFLMELAVKNIVGVQSNAKIDSEGVIVLRVNAEVDYVRALQPIVNVTQMSVEIVGLGEYTGELIPPEEAEKRGKLYDRIDTSFLFNLNNEASWVIDARRLGDKLKFANHSSKPNCYAKVMLVGGDHRVGIFAKENIQAGDEIFYDYWYDLDCAPSWALPPEDSASRRDELVTSQSKAKKR 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00794 751 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 50 566 IPR045318 GO:0006338|GO:0042054
Spst2g00794 751 Gene3D SET domain 608 719 IPR046341 -
Spst2g00794 751 ProSiteProfiles SET domain profile. 615 718 IPR001214 GO:0005515
Spst2g00794 751 SMART set_7 594 726 IPR001214 GO:0005515
Spst2g00794 751 Pfam SET domain 649 717 IPR001214 GO:0005515
Spst2g00794 751 Coils Coil 284 311 - -
Spst2g00794 751 MobiDBLite consensus disorder prediction 730 751 - -
Spst2g00794 751 MobiDBLite consensus disorder prediction 733 751 - -
Spst2g00794 751 SUPERFAMILY SET domain 627 721 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00794 Spst-Chr2 6701865 6720831 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00794 629 717 C2H2 Transcription Factor Family AT2G23740 32.692 5.05e-07 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Spst2g00794 SET 7.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00794 - - vra:106776653 693.73