Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00784 ATGCCGGTTGACTTGGACAATGTTTCCACAGCTTCAGGGGAAGCTAGCGTGTCTTCCTCTGGCAATCAGACAGTGCCCCCAAAACCCACTACAAAGAAGAAGCGAAACCTTCCAGGAATGCCAGATCCGGATGCGGAGGTGATTGCTCTGTCTCCGAAGACCCTGATGGCGACGAACCGGTTCGTGTGTGAAATATGCAACAAGGGGTTTCAGAGGGACCAGAACCTTCAGCTTCATCGGAGGGGTCACAATCTTCCGTGGAAGCTGAGACAGAGGTCAAGCAAGGAGGTGAGGAAGAGGGTGTACGTGTGTCCCGAACCGACGTGCGTTCACCACGATCCTTCCAGAGCGTTGGGGGATCTCACGGGGATTAAGAAGCACTTCTGCAGAAAACACGGCGAGAAGAAGTGGAAATGCGACAAGTGCTCCAAGAAATACGCGGTTCAATCCGATTGGAAGGCTCACTCCAAGATTTGCGGTACCCGAGAGTATAAATGCGATTGTGGCACTCTCTTCTCAAGGAGGGATAGCTTCATCACGCATAGGGCTTTTTGTGATGCGTTGGCTGAGGAAAGTGCGAGATCTCAGCCTCAGACTGTTGCAAAGGCTAGTTCCGAGTCAGATTCGAAAGCTGTGACCGGTGATTCATCGCCTCCGGCGGCGGCGGCGTTGGCGGCTCCTCCTCCACCGCCAGCTGCACCTACGGCTAGTTCTCAGTCAAACAGTGTAGTTGTATCGTCGTCTACTTTGCAGACACAAAATCCAGAGTTGCTAGAAAATGCCCCACAAGTCATAGAAGAACCGCAGGCCAATCCTGCTGTCAGTGGAAGCTGTAGCAGCACCAGTACCAGCACCAGCAGCTCAACAAGCAACAGCAATGGTGGTGCTAGCAGCAGTGTATTTGCAAGCTTGTTTGCTTCATCAACAGCATCCGCAACTGCAAGCCTCCAATCTCAAACACCAGCATTCACTGACCTAATCAGGGCCATGGGGCATCCAGATCATGCTGCAGACCTCTCAAGACCATCATCTTCGGAGCCCATTTCTCTGTGCCTTGCTACCAATCACGGAGCATCCATTTTTGGGACAGGAGTGCAGGAGCGCCGTCAATATGCCCCACTGCCACAGCCAGCCATGTCTGCTACTGCTTTGCTACAGAAAGCCGCCCAGATGGGTGCAGCTGCCACAAATGCCTCTTTTCTTCGTGGATTAGGCATAGTATCATCTGCGTCAACCTCATCAGGTCAGCAAGATAGTTTGCAATGGGGTCAGCAACCAGGGGAACCAGAGGGTGCCTCAGTTCCTTCAGGTCTTGGACTAGGGCTTCCCTGCGACAGCAGCTCTGGACTAAAGGAGTTAATGATGGGGACTCCCTCTATGTTTGGTCCAAAACAGACCACCCTTGATTTTCTCGGGCTGGGGATGGCTGCCGGGGGCACCCACGGTGGAGGCTTATCTGCTCTCATCACCTCAATTGGTGGCAGTCTGGATGTTACTGCTGCAGCAGCAGCAGCAGCATCCTTTGGTAGTGCAGAATTCCCTAGCAAAGATATTGGGAGGAGTACTTGA 1569 0.5296 MPVDLDNVSTASGEASVSSSGNQTVPPKPTTKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVRKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARSQPQTVAKASSESDSKAVTGDSSPPAAAALAAPPPPPAAPTASSQSNSVVVSSSTLQTQNPELLENAPQVIEEPQANPAVSGSCSSTSTSTSSSTSNSNGGASSSVFASLFASSTASATASLQSQTPAFTDLIRAMGHPDHAADLSRPSSSEPISLCLATNHGASIFGTGVQERRQYAPLPQPAMSATALLQKAAQMGAAATNASFLRGLGIVSSASTSSGQQDSLQWGQQPGEPEGASVPSGLGLGLPCDSSSGLKELMMGTPSMFGPKQTTLDFLGLGMAAGGTHGGGLSALITSIGGSLDVTAAAAAAASFGSAEFPSKDIGRST 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00784 522 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 20 481 IPR031140 -
Spst2g00784 522 FunFam protein indeterminate-domain 5, chloroplastic-like 115 194 - -
Spst2g00784 522 FunFam protein indeterminate-domain 12-like 40 108 - -
Spst2g00784 522 Gene3D Classic Zinc Finger 115 195 - -
Spst2g00784 522 MobiDBLite consensus disorder prediction 9 30 - -
Spst2g00784 522 MobiDBLite consensus disorder prediction 412 438 - -
Spst2g00784 522 MobiDBLite consensus disorder prediction 195 252 - -
Spst2g00784 522 Gene3D Classic Zinc Finger 41 107 - -
Spst2g00784 522 MobiDBLite consensus disorder prediction 412 426 - -
Spst2g00784 522 SMART c2h2final6 61 83 IPR013087 -
Spst2g00784 522 SMART c2h2final6 102 132 IPR013087 -
Spst2g00784 522 SMART c2h2final6 137 157 IPR013087 -
Spst2g00784 522 MobiDBLite consensus disorder prediction 269 293 - -
Spst2g00784 522 MobiDBLite consensus disorder prediction 236 252 - -
Spst2g00784 522 MobiDBLite consensus disorder prediction 1 43 - -
Spst2g00784 522 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Spst2g00784 522 MobiDBLite consensus disorder prediction 270 293 - -
Spst2g00784 522 SUPERFAMILY beta-beta-alpha zinc fingers 60 157 IPR036236 -
Spst2g00784 522 MobiDBLite consensus disorder prediction 195 214 - -
Spst2g00784 522 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00784 Spst-Chr2 6633499 6635846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00784 1 522 IDZ Gene Family AT5G66730 60.662 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst2g00784 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00784 K25869 - gmx:100806404 803.127