Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00778 ATGAAGAGGGAAATTGATACCCGTCTTGCGCCGACTCATCAAACCACCAATGGCATGCATGCATATCCAACGAATGCCGTCCACTGGGGTCCACCATGGACACGTTTGATTGACCTCTCAAGTCAACCAAGAAAAACAAAGAAAAAGGAGAAGACAGGACACAGTGGCTTCACCTTGAAGCCTCAAGGGTCGCGTCCTCTTCTCCATCATTCATATCACAAAGCACAAGGTCACACCACAACAACTTTTGTTAGTCATCACCAAGCGATGAGAGTTCCCGTTCCATCGTCCCCACAGGCTAATCCTAAACCAACTAATAACGTAGTCCGTACCATTGCCCTTCCCAACCTCAACACCACGGGCCTGTGCTACGAGCCCACCTCCGTCCTCGACCTCTGCCGCAGCCCCAGCCCGGGCTCCGAAAAGCCCATCGACAACACAGTTGTCGTGACCAACTCCCAAGATTGTCTCGACCTGGACGACCATGCGTTACACAATTTGGATTGGGACTCCATCATGAAGGACTTGGGCTTACACGACGACTCAGGTGCTCCCGTTTTGAAGACTATTTCCCACCCTGACAACAACGACAATAACAACCCATGCGACGACTTCACCATCGCACCTTTCGACCACGCGCTTGAATTCACCACTCTCTCCGACATCTACTCCAACCAGAACCTCGGGTTCGATTTTAACCACTTGGTTCACGACTTCAGCCACCACCATCACCACAACAACAACAACGGCTTCGATTTCATCGAAGAGCTCATCCGCGCCGCGGATTGCTTCGACACCAAGCAGTTACACGTGGCGCAAGTGATATTGGAGCGGCTCAACCAACGGCTACGATCCCCCGTGGGAAGACCTCTCCAACGCGCAGCATTTTACTTCAAAGAAGCTCTCCAGTCTCTTCTCTCCGGTTCGAACCGGACGCCGAGAATTTCCTCCCTGGTAGAAATCGTGCACGGCATCAGAACCTTCAAAGCCTTCTCCGGAATCTCACCGATCCCAATGTTCTCGATCTTCACCACCAATCAGGTGGTTCTCGATCACGCTGCGTGCTCCTTCATGCACGTCATCGACTTCGACATCGGCCTCGGGATTCAGTACGCTTCTCTCATGAAGGAGATAGCGGAGAAGGCCACGGACTCGCCGCTTCTCCGAATCACCGCCGTCGTTCCCGAAGAGTACGCCGTCGAGAGCACACTCGTCCGCGACAACCTCGCTCAGTTCGCTCTTGAACTTATGATCCGCGTCCAGGTCGATTTCGTGCCGCTTCGAACCTTCGAGACGCTCTCCTTCAAGGCCGTGAAGCTCGTCGACGGCGAGAGCACAACTGTGCTCCTCTCGCCGGCGATTTTCCGCCACTTCGGAAATTCCACCGCGTTCTTGGCGGAGGTGCGGAGGGTTTCTCCCAGTGTGGTGGTTTTCGTGGATGGCGAGGGATGGGAGGAGACGGCCACGGCGTCAGTGGCGTCGTTCCGGCGCGGCGTTGTGAGCAGTTTGGAGTACTACTCGATGATGCTGGAGTCGCTGGACGCGTCGACGGCAGGGGGAGGAGGGGAGTGGGTGAGGAGAATCGAGATGATGCAGCTACGACCGAGGATTTTGGCGGCTGTGGAGAGTGCGTGGCGGAGAATTCCGCCGTGGAGGGAGGCGTTTTACGGCGCAGGAATGAGGCCGGTTCAGTTGAGCCAGTTCGCGGATTTTCAAGCGGAGTTCTTGTTGGCCAAGTCGCAAATCAGAGGCTTCCACGTGGAAAAACGTCAGAACGAACTGGTACTCTTCTGGCATGACCGGCCCATGGTTGCCACGTCAGCTTGGCGCTTTTAG 1836 0.5523 MKREIDTRLAPTHQTTNGMHAYPTNAVHWGPPWTRLIDLSSQPRKTKKKEKTGHSGFTLKPQGSRPLLHHSYHKAQGHTTTTFVSHHQAMRVPVPSSPQANPKPTNNVVRTIALPNLNTTGLCYEPTSVLDLCRSPSPGSEKPIDNTVVVTNSQDCLDLDDHALHNLDWDSIMKDLGLHDDSGAPVLKTISHPDNNDNNNPCDDFTIAPFDHALEFTTLSDIYSNQNLGFDFNHLVHDFSHHHHHNNNNGFDFIEELIRAADCFDTKQLHVAQVILERLNQRLRSPVGRPLQRAAFYFKEALQSLLSGSNRTPRISSLVEIVHGIRTFKAFSGISPIPMFSIFTTNQVVLDHAACSFMHVIDFDIGLGIQYASLMKEIAEKATDSPLLRITAVVPEEYAVESTLVRDNLAQFALELMIRVQVDFVPLRTFETLSFKAVKLVDGESTTVLLSPAIFRHFGNSTAFLAEVRRVSPSVVVFVDGEGWEETATASVASFRRGVVSSLEYYSMMLESLDASTAGGGGEWVRRIEMMQLRPRILAAVESAWRRIPPWREAFYGAGMRPVQLSQFADFQAEFLLAKSQIRGFHVEKRQNELVLFWHDRPMVATSAWRF 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00778 611 MobiDBLite consensus disorder prediction 41 67 - -
Spst2g00778 611 Pfam GRAS domain family 254 610 IPR005202 -
Spst2g00778 611 ProSiteProfiles GRAS family profile. 244 610 IPR005202 -
Spst2g00778 611 MobiDBLite consensus disorder prediction 1 27 - -
Spst2g00778 611 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 237 605 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00778 Spst-Chr2 6589250 6595555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00778 157 611 GRAS Transcription Factor Family AT4G36710 55.556 2.12e-166 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst2g00778 GRAS 1.4e-79 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00778 - - gmx:100807470 859.366