Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst2g00760 | ATGCATCTCTTTCCCTTCACTCCCATCATCCTTGTCACCTTTTTGATCCACAACTTCTCTCTGATTCTGGGGCAGCAACCTTATATTGGTTTAGGCACAGTAGCATGCCCTGCAAGAGGTAACAAAAACTCTATTCGAGGTTATACTTGTAATGGTGCAAACAGCTGCCAAACGTACCTTACTTTCAGATCTCAACCCATTTACAACTCTGTCTCCACAATATCTACTTTATTGGGTTCTGACCCGTCCCAACTTGCTAAAATAAATTCGGTTTCCATGAATGATACCTTCGAAACAAACAAGTTGGTGCTTGTTCCGATCAACTGTTCCTGTGCAGGTGAGTATTATCAAACAAACACATCCTATGTGTTCCAGAATTCAGAAACGTACTTCTTGATTGCTAACAACACTTTCGAGGGACTCACAACATGTCAAGCTTTGCAGAATCAAAACTACGACCCAGCAAACATATACCCCGGTAGAAAACTTCTAGTGCCTCTTAGATGTGCTTGTCCCACAAAAAATCAAACCGACACAGGCGTCAGGTACCTCTTAAGTTACTTGGTGAACTGGGGTGATTCTGTTTCATTCGTTAGTGAGAAATTTGGTGTCAACTTTATGACCACTCTTGATGCTAATAGCCTAACTTTGACACAAGCCACGATCTATCCCTTTACCACACTTCTAATTCCCCTTCATGGTAAGCCCTCAAGTTCTCAAACCGTTTCTCCAACTCAACATTCTCCACCACCCTCGTCACCCCCCTCTTCTCATAAAAACAAAACATGGGTGTATGTTGTTGTTGGAGTTGTTGTAGGAGCGGTTGCCTTAACATCTGTTCTCTGTGCTGCCATTTTCTTCACACGCTATCGCAAAGACAAAATCAAGGATAATTCAGTGGTGGCGTCCAAGAAACTTGAGGCAACTGAGAAAAAACCATTAAGGAAAGTGAATGAAAAATTGTCAAAGATCATATCTGGCATAGCTCAATCGTTCAAGGTGTATGATTTCCAGGAATTACAGCGAGCAACAGATAACTTTAGTCCAAGCTACTGGATCAAAGGGTCTGTTTATCGCGGTGTGATTAATGGTGATTTGGCCGCAATTAAAAAGATAGAAGGGGATGTGACAAAGGAAATAGAGATACTGAATAAGATCAACCATTCCAATGTTATACGCCTTTCCGGGGTTAGCTTCCACGAGGGGCGTTGGTACCTTGTTTACGAGTATGCTCCTAATGGAGCTTTGAGTGAATGGATCTACTTCAACGACGTGGATGGAAAGTTTCTGAGTTGGACGCAGAGAATACAGATTGCATTGGATGTGGCCACAGGACTTGATTATCTTCACAGTTTCACTTCTCCTCCTCATATCCACAAGGATATTAACACTAGTAACATTCTTCTGGATGGTGATTTCAGGGGAAAGGTTGCAAATTTAAGCCTTGCTAGGTGTGTGGAAGGAGAAGATGACCAATTTCCTGCCACAAGGCACATTGTTGGGACAAGAGGCTACATGGCTCCCGAGTATTTGGAACATGGTCTTGTGTCTACAATGCTTGATGTGTATGCTTTTGGGATACTGATGCTGGAGATGGTCACAGGAAAAGAGGTAGCAGCTGTTTTAACAGAAGATGAGACAAACTTATCACATGTTTTAAGTGTCCAGGAGAGGTTGAAGGAGTTTGTGGATCCCTCTTTGCGAGAAAATTGTCCATTTGAACTTGCTATGTTTGTGATTGAAATGATTGATCGTTGCATATTGAAAGATCCAGCAAGTCGTCCTACCGTGCATGAGATTGTGCAATCTCTGTCAAGAACCCTGGACTCTTCCATGAGTTGGGAAAGGTCAATGAATGTCCCGCGAAACTAG | 1872 | 0.4257 | MHLFPFTPIILVTFLIHNFSLILGQQPYIGLGTVACPARGNKNSIRGYTCNGANSCQTYLTFRSQPIYNSVSTISTLLGSDPSQLAKINSVSMNDTFETNKLVLVPINCSCAGEYYQTNTSYVFQNSETYFLIANNTFEGLTTCQALQNQNYDPANIYPGRKLLVPLRCACPTKNQTDTGVRYLLSYLVNWGDSVSFVSEKFGVNFMTTLDANSLTLTQATIYPFTTLLIPLHGKPSSSQTVSPTQHSPPPSSPPSSHKNKTWVYVVVGVVVGAVALTSVLCAAIFFTRYRKDKIKDNSVVASKKLEATEKKPLRKVNEKLSKIISGIAQSFKVYDFQELQRATDNFSPSYWIKGSVYRGVINGDLAAIKKIEGDVTKEIEILNKINHSNVIRLSGVSFHEGRWYLVYEYAPNGALSEWIYFNDVDGKFLSWTQRIQIALDVATGLDYLHSFTSPPHIHKDINTSNILLDGDFRGKVANLSLARCVEGEDDQFPATRHIVGTRGYMAPEYLEHGLVSTMLDVYAFGILMLEMVTGKEVAAVLTEDETNLSHVLSVQERLKEFVDPSLRENCPFELAMFVIEMIDRCILKDPASRPTVHEIVQSLSRTLDSSMSWERSMNVPRN | 623 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst2g00760 | 623 | Pfam | LysM domain | 122 | 166 | IPR018392 | - | |
Spst2g00760 | 623 | Pfam | LysM domain | 187 | 231 | IPR018392 | - | |
Spst2g00760 | 623 | PANTHER | LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED | 9 | 616 | - | - | |
Spst2g00760 | 623 | Gene3D | Transferase(Phosphotransferase) domain 1 | 411 | 619 | - | - | |
Spst2g00760 | 623 | FunFam | PTI1-like tyrosine-protein kinase 3 | 411 | 618 | - | - | |
Spst2g00760 | 623 | Pfam | Protein kinase domain | 357 | 603 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst2g00760 | 623 | ProSiteProfiles | Protein kinase domain profile. | 275 | 608 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst2g00760 | 623 | Gene3D | Phosphorylase Kinase; domain 1 | 321 | 410 | - | - | |
Spst2g00760 | 623 | MobiDBLite | consensus disorder prediction | 236 | 258 | - | - | |
Spst2g00760 | 623 | SMART | LysM_2 | 121 | 166 | IPR018392 | - | |
Spst2g00760 | 623 | SMART | LysM_2 | 186 | 231 | IPR018392 | - | |
Spst2g00760 | 623 | SUPERFAMILY | Protein kinase-like (PK-like) | 330 | 604 | IPR011009 | - | |
Spst2g00760 | 623 | ProSiteProfiles | LysM domain profile. | 185 | 230 | IPR018392 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst2g00760 | Spst-Chr2 | 6369299 | 6371170 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst2g00760 | 3 | 617 | Receptor kinase-like Gene Family | AT2G23770 | 42.675 | 1.27e-170 | 498 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Spst2g00760 | Pkinase | 1.4e-36 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst2g00760 | - | - | gmx:100779907 | 1041.95 |