Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00760 ATGCATCTCTTTCCCTTCACTCCCATCATCCTTGTCACCTTTTTGATCCACAACTTCTCTCTGATTCTGGGGCAGCAACCTTATATTGGTTTAGGCACAGTAGCATGCCCTGCAAGAGGTAACAAAAACTCTATTCGAGGTTATACTTGTAATGGTGCAAACAGCTGCCAAACGTACCTTACTTTCAGATCTCAACCCATTTACAACTCTGTCTCCACAATATCTACTTTATTGGGTTCTGACCCGTCCCAACTTGCTAAAATAAATTCGGTTTCCATGAATGATACCTTCGAAACAAACAAGTTGGTGCTTGTTCCGATCAACTGTTCCTGTGCAGGTGAGTATTATCAAACAAACACATCCTATGTGTTCCAGAATTCAGAAACGTACTTCTTGATTGCTAACAACACTTTCGAGGGACTCACAACATGTCAAGCTTTGCAGAATCAAAACTACGACCCAGCAAACATATACCCCGGTAGAAAACTTCTAGTGCCTCTTAGATGTGCTTGTCCCACAAAAAATCAAACCGACACAGGCGTCAGGTACCTCTTAAGTTACTTGGTGAACTGGGGTGATTCTGTTTCATTCGTTAGTGAGAAATTTGGTGTCAACTTTATGACCACTCTTGATGCTAATAGCCTAACTTTGACACAAGCCACGATCTATCCCTTTACCACACTTCTAATTCCCCTTCATGGTAAGCCCTCAAGTTCTCAAACCGTTTCTCCAACTCAACATTCTCCACCACCCTCGTCACCCCCCTCTTCTCATAAAAACAAAACATGGGTGTATGTTGTTGTTGGAGTTGTTGTAGGAGCGGTTGCCTTAACATCTGTTCTCTGTGCTGCCATTTTCTTCACACGCTATCGCAAAGACAAAATCAAGGATAATTCAGTGGTGGCGTCCAAGAAACTTGAGGCAACTGAGAAAAAACCATTAAGGAAAGTGAATGAAAAATTGTCAAAGATCATATCTGGCATAGCTCAATCGTTCAAGGTGTATGATTTCCAGGAATTACAGCGAGCAACAGATAACTTTAGTCCAAGCTACTGGATCAAAGGGTCTGTTTATCGCGGTGTGATTAATGGTGATTTGGCCGCAATTAAAAAGATAGAAGGGGATGTGACAAAGGAAATAGAGATACTGAATAAGATCAACCATTCCAATGTTATACGCCTTTCCGGGGTTAGCTTCCACGAGGGGCGTTGGTACCTTGTTTACGAGTATGCTCCTAATGGAGCTTTGAGTGAATGGATCTACTTCAACGACGTGGATGGAAAGTTTCTGAGTTGGACGCAGAGAATACAGATTGCATTGGATGTGGCCACAGGACTTGATTATCTTCACAGTTTCACTTCTCCTCCTCATATCCACAAGGATATTAACACTAGTAACATTCTTCTGGATGGTGATTTCAGGGGAAAGGTTGCAAATTTAAGCCTTGCTAGGTGTGTGGAAGGAGAAGATGACCAATTTCCTGCCACAAGGCACATTGTTGGGACAAGAGGCTACATGGCTCCCGAGTATTTGGAACATGGTCTTGTGTCTACAATGCTTGATGTGTATGCTTTTGGGATACTGATGCTGGAGATGGTCACAGGAAAAGAGGTAGCAGCTGTTTTAACAGAAGATGAGACAAACTTATCACATGTTTTAAGTGTCCAGGAGAGGTTGAAGGAGTTTGTGGATCCCTCTTTGCGAGAAAATTGTCCATTTGAACTTGCTATGTTTGTGATTGAAATGATTGATCGTTGCATATTGAAAGATCCAGCAAGTCGTCCTACCGTGCATGAGATTGTGCAATCTCTGTCAAGAACCCTGGACTCTTCCATGAGTTGGGAAAGGTCAATGAATGTCCCGCGAAACTAG 1872 0.4257 MHLFPFTPIILVTFLIHNFSLILGQQPYIGLGTVACPARGNKNSIRGYTCNGANSCQTYLTFRSQPIYNSVSTISTLLGSDPSQLAKINSVSMNDTFETNKLVLVPINCSCAGEYYQTNTSYVFQNSETYFLIANNTFEGLTTCQALQNQNYDPANIYPGRKLLVPLRCACPTKNQTDTGVRYLLSYLVNWGDSVSFVSEKFGVNFMTTLDANSLTLTQATIYPFTTLLIPLHGKPSSSQTVSPTQHSPPPSSPPSSHKNKTWVYVVVGVVVGAVALTSVLCAAIFFTRYRKDKIKDNSVVASKKLEATEKKPLRKVNEKLSKIISGIAQSFKVYDFQELQRATDNFSPSYWIKGSVYRGVINGDLAAIKKIEGDVTKEIEILNKINHSNVIRLSGVSFHEGRWYLVYEYAPNGALSEWIYFNDVDGKFLSWTQRIQIALDVATGLDYLHSFTSPPHIHKDINTSNILLDGDFRGKVANLSLARCVEGEDDQFPATRHIVGTRGYMAPEYLEHGLVSTMLDVYAFGILMLEMVTGKEVAAVLTEDETNLSHVLSVQERLKEFVDPSLRENCPFELAMFVIEMIDRCILKDPASRPTVHEIVQSLSRTLDSSMSWERSMNVPRN 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00760 623 Pfam LysM domain 122 166 IPR018392 -
Spst2g00760 623 Pfam LysM domain 187 231 IPR018392 -
Spst2g00760 623 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 9 616 - -
Spst2g00760 623 Gene3D Transferase(Phosphotransferase) domain 1 411 619 - -
Spst2g00760 623 FunFam PTI1-like tyrosine-protein kinase 3 411 618 - -
Spst2g00760 623 Pfam Protein kinase domain 357 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00760 623 ProSiteProfiles Protein kinase domain profile. 275 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00760 623 Gene3D Phosphorylase Kinase; domain 1 321 410 - -
Spst2g00760 623 MobiDBLite consensus disorder prediction 236 258 - -
Spst2g00760 623 SMART LysM_2 121 166 IPR018392 -
Spst2g00760 623 SMART LysM_2 186 231 IPR018392 -
Spst2g00760 623 SUPERFAMILY Protein kinase-like (PK-like) 330 604 IPR011009 -
Spst2g00760 623 ProSiteProfiles LysM domain profile. 185 230 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00760 Spst-Chr2 6369299 6371170 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00760 3 617 Receptor kinase-like Gene Family AT2G23770 42.675 1.27e-170 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Spst2g00760 Pkinase 1.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00760 - - gmx:100779907 1041.95