Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00753 ATGACGTTGTTTGCGAGCCATGTTCTCCTTCCTCTTCTTCTCTCCACAAATGGTCTTCGTCGTCAACGCTTCTTCTTACTCCCTCATATTGTTCACAAGTTCCTTCCTAGTCTGTCTCCTACCCTTTGCGAGTCTTCGTATTCTCCCTTCCTGTGTGTGAGTTGCATCTTCTTCCCCTTCTGTGGTGAGAGTGATGCTGGACAATATTGTGTGGTGGAACGAGTGATTGCCATACAAAATGTGGTAGCAGCTGAACTCGAATTTCGAGAAGCAAGACAAACATTGACTGTGTGCATGCATTTAACCAAAAATGACAGTGATGAAGTTGTGTCAAGATCAACTGACAAAGTGCCTAATATGACCTACATGACCTTACCAACTGAGGGTCTCATCTCCATTGTTAATGATTGTGTAGGGCTCTATGATAAGATAAGTAATTCAACTATTGGACAGAGCAACACCATCACATTCATCGAGGAGACTAGTGCTATACACCATTGGTTTTCTTTTCGATCTTGGATTAATTGTTGCAATTCTATGTCCCAAGATTTTCAACAAGGAATCTTCAACTTCCCGAATGGGTTGGAGAGAGGAAGGGTGAGTCCGCAGCAGCAGATCCGGAGGGACAAAGTAAGGTTGCAAGGAGGGTTCGAGGCGGCGCCATTGGTAGGGATAGAGGAAGCAGAACCTGTGTACGAGTCGGCCGGGATGTTGTCCGAGATGTTCAATTTCCCCCCTGCGACAGAATTGCTGGAGCAGCAGCCTGTGACGGCCACGTTTAGGGCGGCGAGGCAGGCCGGAGAGTGGTACGGAAACAGACAACAACAGCAACAACAAGGGGTGAATATGATGATGGATGGGTTGGGGGATTCGAAGAACCAAAATGGTGTGAATAACAACCAGCATCAACCGCAGCACCAGATTTCAAGCATTAATGCTGACTCAGCAGCTGCCATGCAACTTTTTCTGATGAACCCTCAAACGAGGTCGCCTTCCCCTCCTCAGAGCCATGCCACTCCTTCCTCAACTCTCCACATGTTGCTTCCCAATCCTTCTTCCAATTCCCTCCAAGGTTTCACAGGTTCGGCCACGGGAGGGTCTTTTGGTCAATTCCCATGGGTTCCTGAGAGTGCTCATCAACACGGAGGCTTAGTGGAAGGGCAAGGTCTTTCGCTATCGTTATCTTCTTCACTGCAAGCAGCCAAAGCCGAGGAATTGAGGATGGGGGATAGTGGTTTTCTATATTACAATCATCAACAAGGAGGTGGTGGAGTTGGAGGTGGATCTTCTTCTTCTTCCACAGTTCAATTTCCGTACAAGAACAACAATCATCACCAGGCATTGCATTTGCAAGGGGTGATTGGACACGACAACAACCACCAGGGACATGTTGGGTTTGGGTCATCCTCGTTAGGTGTAGTTAATGTTCTGAGAAATTCAAAGTATGTGAAGGCCGCACAAGAGTTGCTTGAAGAGTTTTGCAGTGTTGGGAGGGGTCAGTTTAAGAAGAGTAAGTTCAATAAGCAGAATTCAAACCCTAATTCAAATCCTGGTGGTGATGGTGGTGGTTCTTCGCCTTCATCAAAAGATGCTGCTGCTGCTCCTCCTCCTCCTTTGTCAGCGGGTGATAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCAATGCTTGATGAGGCATGTATTGTGGACAGGAGATACAACCATTACTGCGAGCAAATGCAAATGGTGGTGAACTCATTTGACATGATGATGGGTTTTGGCGCGGCAGTTCCATACACAGCACTGGCGCAGAAAGCAATGTCTCGGCATTTCCGGTGTCTGAAGGACGCTATAACAGCACAGCTGAAGCAAAGTTGTGAGCTCCTAGGAGATAAAGACGGGGCGGGGACCTCAGGTTTGACCAAGGGTGAGACCCCAAGGCTTAAGATGCTAGAGCAAAGCCTTAGACAGCAGAGAGCCTTCCACCAGATGGGTATGATGGAACAAGAAGCTTGGAGACCTCAGAGAGGCTTGCCTGAACGATCTGTCAACATTTTGAGAGCTTGGCTTTTCGAGCATTTTCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCACGACAGACTGGACTATCGCGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAACTCAAAGAAGCAGAGAGTGCAGAAGTGAGAGAAAAGAACCAAAGCAACAATAGCAATACTAGTGAGAACCAAACACAAACTCCAACCACATCAGGAGCGGCTACAACATCAACAGCAACACCAACATCCACTACAACAACAAAACCAACAGAAAAAAATGCCGATTTCAATACCACTGAAAGCAACCCTTCACCCGTTGCAATGAATACACAAGGTTTCTCGGAAAACCAAGCAAAGCAGACCACCACCACCTCCACCACTATTATGCCATCCATCAGCGCCACCATTTCTGAGGTGGTGCCACCCGTGTCGCAGTGCTTCGACTCAGACCTGGCCCCTCACAGATTAATGGTCACTGACGACACGTGTCGCTTGGTCACTACAGATTTTGGGACCGCATCTGCAACTGCTGACATTGGATCCACACTCATTAGATTTGGGACCACCGGTGATGTGTCACTCACCCTAGGGCTTCGCCACGCCGGGAACATGCCCGAGAAAACTCCTTTCTCTGTTAGAGATTTTGGAGCCATTTAA 2745 0.478 MTLFASHVLLPLLLSTNGLRRQRFFLLPHIVHKFLPSLSPTLCESSYSPFLCVSCIFFPFCGESDAGQYCVVERVIAIQNVVAAELEFREARQTLTVCMHLTKNDSDEVVSRSTDKVPNMTYMTLPTEGLISIVNDCVGLYDKISNSTIGQSNTITFIEETSAIHHWFSFRSWINCCNSMSQDFQQGIFNFPNGLERGRVSPQQQIRRDKVRLQGGFEAAPLVGIEEAEPVYESAGMLSEMFNFPPATELLEQQPVTATFRAARQAGEWYGNRQQQQQQGVNMMMDGLGDSKNQNGVNNNQHQPQHQISSINADSAAAMQLFLMNPQTRSPSPPQSHATPSSTLHMLLPNPSSNSLQGFTGSATGGSFGQFPWVPESAHQHGGLVEGQGLSLSLSSSLQAAKAEELRMGDSGFLYYNHQQGGGGVGGGSSSSSTVQFPYKNNNHHQALHLQGVIGHDNNHQGHVGFGSSSLGVVNVLRNSKYVKAAQELLEEFCSVGRGQFKKSKFNKQNSNPNSNPGGDGGGSSPSSKDAAAAPPPPLSAGDRIEHQRRKVKLLSMLDEACIVDRRYNHYCEQMQMVVNSFDMMMGFGAAVPYTALAQKAMSRHFRCLKDAITAQLKQSCELLGDKDGAGTSGLTKGETPRLKMLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQELKEAESAEVREKNQSNNSNTSENQTQTPTTSGAATTSTATPTSTTTTKPTEKNADFNTTESNPSPVAMNTQGFSENQAKQTTTTSTTIMPSISATISEVVPPVSQCFDSDLAPHRLMVTDDTCRLVTTDFGTASATADIGSTLIRFGTTGDVSLTLGLRHAGNMPEKTPFSVRDFGAI 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00753 914 SMART prehox3 471 615 IPR006563 -
Spst2g00753 914 MobiDBLite consensus disorder prediction 504 523 - -
Spst2g00753 914 MobiDBLite consensus disorder prediction 504 545 - -
Spst2g00753 914 MobiDBLite consensus disorder prediction 747 821 - -
Spst2g00753 914 Pfam Homeobox KN domain 684 723 IPR008422 GO:0003677|GO:0006355
Spst2g00753 914 ProSiteProfiles 'Homeobox' domain profile. 664 727 IPR001356 GO:0003677
Spst2g00753 914 MobiDBLite consensus disorder prediction 284 307 - -
Spst2g00753 914 Gene3D - 670 732 - -
Spst2g00753 914 FunFam BEL1-like homeodomain protein 4 670 732 - -
Spst2g00753 914 MobiDBLite consensus disorder prediction 740 821 - -
Spst2g00753 914 SUPERFAMILY Homeodomain-like 669 734 IPR009057 -
Spst2g00753 914 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 332 753 - -
Spst2g00753 914 SMART HOX_1 667 731 IPR001356 GO:0003677
Spst2g00753 914 Pfam Associated with HOX 476 614 IPR006563 -
Spst2g00753 914 CDD homeodomain 667 728 IPR001356 GO:0003677
Spst2g00753 914 Coils Coil 730 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00753 Spst-Chr2 6268274 6284983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00753 178 714 Homeobox Transcription Factor Family AT4G36870 51.269 2.73e-143 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Spst2g00753 POX 9.2e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00753 - - gmx:100786231 998.038