Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00750 ATGGAAGTGCTTCCTTGTTCTGGTGTTCAATATGCTGGAGAATCTGATTGCACTCAGCAGAGTTCAGGGACAGCTTTTGTATACCAGGAAGAACCTAATTGTGCTGAAAATGGTGAACAAATCAAACTGGTAGCTGCTCAACTGAATGAATCATCACATAAAATGCAAGGGCCTCAGATAGAAACGCAAGGTGATTTGTCAACTAATTCAGATTGCCGATGCATTGGAGCTTCGTGTTGTGACTGTCAAGTGGATGATCAAAATGAATATTGTGGTTTCCATGATTTTGAAGAAGACATTATAAATGAACCTTTATTGACATCTGACAACTCTATCTCTGTCATTGATACAATTGAAAGTGAATCACCAAACAATAGTAGGGATGGAGACTTGTCATGTTCTGAACCCAAGTGGCTAGAGGGGGATGGATCAGTGGCATTGTGGGTCAAGTGGAGGGGGAAGTGGCAGGCTGGTATCCGGTGTGCAAGGGCTGACTGGCCGTTATCAACTTTGAAGGCAAAACCAACTCATGAAAGAAAGAAATATTTTGTTATATTCTTTCCACACACAAGGATTTATTCTTGGGCGGACATGCTACTCGTTAGATCAATTAATGAGTTTCCCCATCCCATTGCATATAAGACTCATCAAGTGGGACTGAAAATGGTCAACGACTTAACTGTTGCTCGGCGGTTTATAATGCAAAAGCTAGTCGTGGGCATGCTGAACATGGTCGATCAGTTTCCTTTTAATGCTTTGACAGAAACTGCTCGCGACATGAAGGTCTGGAAGGAGTTTGCCATGGAGGCTTCTCGTTGTAATGGTTATTCTGATTTTGGAAGAATGCTTCTAAAGCTGCATAACAGCATATTGCAGCACCATATAAATGCTGACTGGTCACGGCATTCTTATCCCTCTTGGACTGAAAGATGTCAGAGTGCAAATAGCGCTGACTCAGTGGAGCTATTGAAGGAGATACCAGTCAAGGTGTTGGAATTGTTTGATTCTATTTTGTGGAATGGGATCGATACTATCTCTGATGCACCAGTGCAACCAAGATTAAGTTCTGAATGGAAAACCTGGAAGCATGATGTAATGAAATGGTTTTTGACACCGCCTTCCTTATCCAGCAGCAAAGAAACCCAGCAACAGAGTACTGATGATTTGTACCAAGCAAACGTTCAGGTTTGTAGAAAAAGGGCCAAACTTGAAGTTCGTCGTGCAGATACACATGCTTCACATGTGGAAATCAAGGCCCAAATTATTGCACTACAGGCTGACCCTGGCTTCCTTAAGGATCAGGGCACACTGAGCACATTAGCAGCTGAGTCTTGCAAACAGGAAGGTGTTAGGGAGGTGTCTGTGGCTACTGATTCACCTGGTAATTTGGCGGATAAATGGAATGAAATTGTAGTTGAGAATACTGACCCCGATTTCTTGCATCCCCAAGAAATGGACTTAACGCCTACAAATCAAATGGCTGTTGCAAAATCTATAGAACCTGGTAGTAAGAATCGGCAATGCATAGCTTTTATTGAAGCAAAGGGAAGACAGTGTGTAAGATGGGCAAATGATGGTGATGTGTACTGTTGTGTACATTTATCCTCCCGATTTTTGGGAAGCTCAACAAAATCTGAAAAGCCTGTTCCAGTTGATACTCCAATGTGCGAAGGCACTACTGTTCTGGGTACTAGATGTAAGCATCGTGCCCTACCTGGCTCTTTATTCTGCAAGAAACACCGGCCACATGCTGAAACAGAGCAGATTTCAAATATTCCGCAGAATACACTTAAGAGGAAACATGAGGAAAATTATACTGGTTCAGAGGGCATTTTCTCCAAAGACTTGGTAATGGTAAATGTTGAAAGTCCAATACAAGTGGATCCAGTGTCATCCATTGGTGGTGATTCCGTACATAGAGGAAACAACTTTAACGAGAAGCCCATGCATTCTGAAAATGATCATAATGCAATGGAGTCACTGCACTGTATAGGTTCCCCTCCCTATGATAGAAAGAACGCTTGTAGGGAAGTTCCTAAACGGTATTGCTTGTACTGTGAAACACACCTGCCTAGCTGGCTTAAGCGTGCAAGAAATGGGAAGAGTAGAATAGTATCAAAAGAAGTTTTCACAGAACTTTTGAGGGACTGCAGCTCATGGGAGCAAAAGGTACATCTGCATAAAGCATGTGAACTTTTTTACAGGCTTTTTAAAAGCATTTTGTCATTAAGAAACCCTGTTCCTAAGGATGTCCAATTTCAGTGGGCTCTGACTGAAGCCTCTAAAGATTCTAGTGTAGGAGAGTTTTTTCGGAAGTTAGTCCATAGTGAGAAGACCAGAATCAAGGCAATATGGGGATTCAATGATGACATGGATATATCCTCTGTCATGGAAGAACCACCTCTCTTGCCATCCATAATTAATGATAACGAAAATGCCATTAAGTGTAAGCTATGCTCTGCAGACTTTCCTGATGACCAAGAACTTGGTAACCATTGGATGGACAGTCATAAAAAGGAGGCACAGTGGCTGTTTCGAGGCTATGCATGTGCCATTTGTTTGGATTCATTTACTAACAAGAAACTGTTGGAAACTCATGTTCAGGAGAGACACCATGTGCAATTTGTTGAACAATGCATGCTTCTCCAGTGCATTCCTTGTGGGAGTCATTTTGGAAATACTGAACAATTATGGCAGCATGTTTTATCAGTTCATCCTGTTGATTTTAAACCATCAAAAGCTCCTGAGCAGCAAACTTTCTCCACTGGCGAAGATTCTCCAGTTAAACATGATCAGGGAAATTCAGCCCCTTTGGAGAATAATTCTGAGAATACAGGTGGTTTTCGGAAATTTGTTTGCAGGTTTTGTGGGTTGAAATTTGATTTACTACCTGACCTCGGTCGACATCACCAAGCTGCTCATATGGGGCCTAATCTGGCCAGTAGTCGCCCTGCAAAGAGGGGAGTTCGATATTATGCATACAGATTAAAGTCTGGCAGACTTAGCCGCCCTAGATTTAAAAAAAGTTTGGCAGCAGCATCATACAGACTTAGAAATAAGGCTAATGCTAATTTAAAGCGATGCATTCAGGAAACAAACTCCCATGGCACAGGAGGAATAACCATACAACCTCATGTTACTGAAACAACAAATATTGGTAGATTGGCAGAACATCAATGCTCAGCTGTTTCAAAGATTTTGTTTTCAGAGATTCAGAAGACAAAATCTCGACCTAACAATCTTGATATTGTATCGATTGCTCGTACTGCTTGCTGCAAAGTTAGTCTTGTAACATCACTGGAGGAGAAATATGGAATTCTTCCTGAAAAGCTCTATTTGAAGGCTGCAAAACTTTGTAGTGAGCATAATATTTTGGTACATTGGCACCAGGAAGGGTTTATTTGTCCTAGAGGTTGTAATGTATCAAAGGATCAGTCTTTGCTCCCTCCTTTAGCGTCTCTTCCTAATAGTTCTGTAATGCCCAAATCTGTAAATTTGTCTGATCCTGCAACTGATGGGTGGGAAGTGGATGAATTTCACTGCATCATCAATTCACATACTTTAAAGTTAGGTTCACTGCAAAAAGACGTTGTCTTGTGTGATGACATTAGCTTTGGGAAGGAAGCAGTTCCAGTGACTTGTGTAGTAGATCAAGAACTTGTGAATTCTCTTAATATCAATGGGTGTAATAGACAGAATGTAAATCCTTCAATGCCTTGGGAGACCTTTACGTATGTTACAAAGCCAATGCTTGATCAATCCCTTATTCTTGATTCAGAGAGTCTGCAACTGGGATGTGCCTGCTCATACACTACCTGCTGTCCTGAGACTTGTGATCATGTATACCTTTTCGGCAATGACTATGATGATGCAAAAGACATATTTGGGAAACCAATGCGTGGCAGGTTCCCATATGATGAGAATGGTCGAATAATCCTGGAGGAAGGTTATCTTGTCTATGAGTGTAATCGAATGTGCAGATGCAATAAATCCTGTCCAAATAGAGTATTACAGAATGGAGTACGGGTCAAAGTGGAAGTTTTTAAAACAGAGAAAAAGGGATGGGCAGTGAGGGCTGGTGAAGCTATTCTACGTGGCACATTTGTATGTGAATACATTGGAGAAGTTTTAGATGTGAAAGAGGCACATGATAGGCGCAAGAGATATGGCACAGAGCATTGCAGCTATTTCTACAACATTGATGCTCGTGTTAATGATATGAGCAGATTGATTGAAGGACAGGCTCAATATGTAATTGATGCTTCAAAATTTGGAAATGTTTCGAGATTCATCAATCATAGTTGCTCGCCAAATCTTGTCAATCACCAAGTTCTAGTAGAGAGCATGGATTCGGAACGTGCACACATTGGTTTTTATGCATGTCGAGATATTGCTTTGGGTGAAGAGCTAACGTATGACTATCAGTACGAGCTTGGGCCTGGAGAAGGATATCCTTGTCTTTGCGAATCCTTGAAATGTAGGGGACGCCTGTATTAG 4497 0.4147 MEVLPCSGVQYAGESDCTQQSSGTAFVYQEEPNCAENGEQIKLVAAQLNESSHKMQGPQIETQGDLSTNSDCRCIGASCCDCQVDDQNEYCGFHDFEEDIINEPLLTSDNSISVIDTIESESPNNSRDGDLSCSEPKWLEGDGSVALWVKWRGKWQAGIRCARADWPLSTLKAKPTHERKKYFVIFFPHTRIYSWADMLLVRSINEFPHPIAYKTHQVGLKMVNDLTVARRFIMQKLVVGMLNMVDQFPFNALTETARDMKVWKEFAMEASRCNGYSDFGRMLLKLHNSILQHHINADWSRHSYPSWTERCQSANSADSVELLKEIPVKVLELFDSILWNGIDTISDAPVQPRLSSEWKTWKHDVMKWFLTPPSLSSSKETQQQSTDDLYQANVQVCRKRAKLEVRRADTHASHVEIKAQIIALQADPGFLKDQGTLSTLAAESCKQEGVREVSVATDSPGNLADKWNEIVVENTDPDFLHPQEMDLTPTNQMAVAKSIEPGSKNRQCIAFIEAKGRQCVRWANDGDVYCCVHLSSRFLGSSTKSEKPVPVDTPMCEGTTVLGTRCKHRALPGSLFCKKHRPHAETEQISNIPQNTLKRKHEENYTGSEGIFSKDLVMVNVESPIQVDPVSSIGGDSVHRGNNFNEKPMHSENDHNAMESLHCIGSPPYDRKNACREVPKRYCLYCETHLPSWLKRARNGKSRIVSKEVFTELLRDCSSWEQKVHLHKACELFYRLFKSILSLRNPVPKDVQFQWALTEASKDSSVGEFFRKLVHSEKTRIKAIWGFNDDMDISSVMEEPPLLPSIINDNENAIKCKLCSADFPDDQELGNHWMDSHKKEAQWLFRGYACAICLDSFTNKKLLETHVQERHHVQFVEQCMLLQCIPCGSHFGNTEQLWQHVLSVHPVDFKPSKAPEQQTFSTGEDSPVKHDQGNSAPLENNSENTGGFRKFVCRFCGLKFDLLPDLGRHHQAAHMGPNLASSRPAKRGVRYYAYRLKSGRLSRPRFKKSLAAASYRLRNKANANLKRCIQETNSHGTGGITIQPHVTETTNIGRLAEHQCSAVSKILFSEIQKTKSRPNNLDIVSIARTACCKVSLVTSLEEKYGILPEKLYLKAAKLCSEHNILVHWHQEGFICPRGCNVSKDQSLLPPLASLPNSSVMPKSVNLSDPATDGWEVDEFHCIINSHTLKLGSLQKDVVLCDDISFGKEAVPVTCVVDQELVNSLNINGCNRQNVNPSMPWETFTYVTKPMLDQSLILDSESLQLGCACSYTTCCPETCDHVYLFGNDYDDAKDIFGKPMRGRFPYDENGRIILEEGYLVYECNRMCRCNKSCPNRVLQNGVRVKVEVFKTEKKGWAVRAGEAILRGTFVCEYIGEVLDVKEAHDRRKRYGTEHCSYFYNIDARVNDMSRLIEGQAQYVIDASKFGNVSRFINHSCSPNLVNHQVLVESMDSERAHIGFYACRDIALGEELTYDYQYELGPGEGYPCLCESLKCRGRLY 1498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00750 1498 SMART preset_2 1200 1327 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Spst2g00750 1498 SUPERFAMILY SET domain 1193 1488 IPR046341 -
Spst2g00750 1498 Pfam SET domain 1354 1474 IPR001214 GO:0005515
Spst2g00750 1498 ProSitePatterns Zinc finger C2H2 type domain signature. 816 837 IPR013087 -
Spst2g00750 1498 ProSitePatterns Zinc finger C2H2 type domain signature. 884 905 IPR013087 -
Spst2g00750 1498 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1498 - -
Spst2g00750 1498 Gene3D SET domain 1182 1478 IPR046341 -
Spst2g00750 1498 ProSiteProfiles SET domain profile. 1343 1475 IPR001214 GO:0005515
Spst2g00750 1498 SMART set_7 1343 1481 IPR001214 GO:0005515
Spst2g00750 1498 Pfam Zinc finger C2H2-type, 3 repeats 850 975 IPR040689 -
Spst2g00750 1498 ProSiteProfiles Pre-SET domain profile. 1264 1340 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Spst2g00750 1498 Gene3D Classic Zinc Finger 807 879 - -
Spst2g00750 1498 Pfam Pre-SET motif 1203 1335 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Spst2g00750 1498 SMART c2h2final6 814 837 IPR013087 -
Spst2g00750 1498 SMART c2h2final6 848 871 IPR013087 -
Spst2g00750 1498 SMART c2h2final6 951 974 IPR013087 -
Spst2g00750 1498 SMART c2h2final6 882 905 IPR013087 -
Spst2g00750 1498 MobiDBLite consensus disorder prediction 913 942 - -
Spst2g00750 1498 ProSiteProfiles Post-SET domain profile. 1482 1498 IPR003616 -
Spst2g00750 1498 ProSiteProfiles Zinc finger C2H2 type domain profile. 951 979 IPR013087 -
Spst2g00750 1498 MobiDBLite consensus disorder prediction 914 942 - -
Spst2g00750 1498 ProSitePatterns Zinc finger C2H2 type domain signature. 953 974 IPR013087 -
Spst2g00750 1498 ProSiteProfiles Zinc finger C2H2 type domain profile. 848 871 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00750 Spst-Chr2 6230206 6240978 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00750 95 1497 C2H2 Transcription Factor Family AT2G23740 51.082 0.0 1401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Spst2g00750 Pre-SET 1.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00750 - - gmx:100786757 2724.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00750 2 6230206 6240978 Spst2g00750 2 6230206 6240978 ECH