Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00735 ATGTTTCTTCTGCACCGTACAAATCTCGTTATAGTCCTCGCGATCTTGATAGCCTGCACAACAAAAGCGCAAAACCTCACCTGTAATAGCCATTGCGGGAAGCTAACTCTTCAGTTCCCTTTTGGGTTCTCCGATGGTTGTAAAATCAGACTAAACTGTTCCGACAACCAAGTCCAACTTGACGAATTTCTGGTCCAAAACGTTACCAACAGCAGCATATTCGTCAATCTCCCTGCAAAATGCAAACGCAGCATGCAATCCATTGAGCCACTTTTCAGTAGGAATTTTGCCCCCTCGGTTAACAACAGCTTTCTGGTGCAAGGTTGCAGCGAGGTGTTTGGTGGGTGTGTTATTCCTGCTTCGAATTTTGTGGAGAGCTGCGATAAGCAAAGTGGTAACATCAGTTGCTTTTCGAAACAAGATGCGGGGGATGTTGTGACATACCAAGATTTGGAAGAAACTAAGTGTAAATATTTGTTCTCTGCGGTTTCTTTTGGACAGAGGGAGGAGGAGATTGCGCTGCAGTTTCAGGTGGTTGAGTTGGGGTGGTGGCTTCATGGACACTGTGATGAATGTTCTGATAACGCTACCTGCACACAGGTCCCTCACCAAGAAGGGTTTCGATGCCAGTGTATTCAGGGTTTCACCGGCGACGGCTTCAGGAGCGGCACCGGTTGCCTGAAAGCTTCGACTTCAAGTTGCAGTGCTTCAACACTAACTTCATGTGGAAAAGCAACCAAAATCGGTGTTGCTGTTGGAGCGATCGTAGCTGGAGCATTGGTGGTGGCTGGTCTGTTTCTTCTATGCTACTGTGCCAGGCGCCGTTCTATTTGGTTGGGAAAGCATACCAGAGTGAAGCGCCAATTACGTGAAGCTGCAGGCAACTCTAGTATACCTTTCTATCCCTACAAAGAAGTAGAAAAAGCCACAAACTCTTTCTCTGAGAAACACATGCTGGGAACAGGGGCATTTGGTACAGTTTATGCAGGAAAATTGCACAATGATGAATGGGTTGCTATAAAGAAGTTAAGGCAAAGAGACACCAACAGTGCTGACCAAGTCATGAATGAGATCAAGCTCCTTTCTTCAGTGAGTCACCCAAATTTAGTTCGCCTCTTAGGCTGCTGCATAGAGAAGGGAGAGCAGATCCTTGTTTATGAATATATGCAAAATGGAACGCTTTCTCAGCACTTGCAAAGAGAGAGGAGTGAGGGACTACCATGGACAATAAGACTTACCATTGCTACTGAAACTGCTAATGCTATAGCATATCTCCATTCCGCAATTCATCCCCCAATTTACCACAGAGACATAAAATCTAGTAATATACTTTTGGATTATCACTTCAAATCTAAGATAGCTGATTTTGGGCTTTCTAGGCTTGGCATGACAGAAACTTCTCATATCTCAACCGCCCCACAAGGAACTCCCGGTTATGTCGATCCCCAATACCACCAGAACTTCCATCTTTCTGATAAAAGTGATGTGTACAGTTTTGGAGTGGTCTTGGTAGAGATAATAACTGCCATGAAAGTGGTTGATTTTTCTCGACCTCGGAGTGAGGTTAACTTAGCTGCACTTGCCGTAGATAGGATTAGGAGGGGTGCTGTAGATGATATCATAGATCCCTTCCTTGAACCACATAGAGATGCTTGGACATTATATTCCATTCATAAGGTAGCTGAGCTTGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACTATGATGGAAGTGGCAGAGGAGCTAGAACACATTAAACGAAGTGGATGGGCAACTACGGAGGAAACTGTCATGGCTTCATCGATTGGGTCCACTTGTTCATCACCTCGCAATGGAAGTGAGAAGTCACTGAGTGGTATTAAAAAGGCTGGCCATGGGAGTGAGAGATTGATAGTTCCACAAAAGATTGAGAGATTTTTTCATTCTGTGGAGGTGAAGGACAGCTCCCCTGTATCAGTTCATGATCCTATTCATTGGTCAAGTGGACACAGCTCACCTTCATCAAACAGCTTGTTGGTAAACGTCATCCCTTGA 2043 0.4484 MFLLHRTNLVIVLAILIACTTKAQNLTCNSHCGKLTLQFPFGFSDGCKIRLNCSDNQVQLDEFLVQNVTNSSIFVNLPAKCKRSMQSIEPLFSRNFAPSVNNSFLVQGCSEVFGGCVIPASNFVESCDKQSGNISCFSKQDAGDVVTYQDLEETKCKYLFSAVSFGQREEEIALQFQVVELGWWLHGHCDECSDNATCTQVPHQEGFRCQCIQGFTGDGFRSGTGCLKASTSSCSASTLTSCGKATKIGVAVGAIVAGALVVAGLFLLCYCARRRSIWLGKHTRVKRQLREAAGNSSIPFYPYKEVEKATNSFSEKHMLGTGAFGTVYAGKLHNDEWVAIKKLRQRDTNSADQVMNEIKLLSSVSHPNLVRLLGCCIEKGEQILVYEYMQNGTLSQHLQRERSEGLPWTIRLTIATETANAIAYLHSAIHPPIYHRDIKSSNILLDYHFKSKIADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFSRPRSEVNLAALAVDRIRRGAVDDIIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPTMMEVAEELEHIKRSGWATTEETVMASSIGSTCSSPRNGSEKSLSGIKKAGHGSERLIVPQKIERFFHSVEVKDSSPVSVHDPIHWSSGHSSPSSNSLLVNVIP 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00735 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Spst2g00735 680 Gene3D Transferase(Phosphotransferase) domain 1 389 606 - -
Spst2g00735 680 ProSiteProfiles EGF-like domain profile. 185 221 IPR000742 -
Spst2g00735 680 Gene3D Laminin 189 222 - -
Spst2g00735 680 FunFam Wall-associated receptor kinase-like 14 281 388 - -
Spst2g00735 680 ProSitePatterns Protein kinases ATP-binding region signature. 319 342 IPR017441 GO:0005524
Spst2g00735 680 MobiDBLite consensus disorder prediction 660 680 - -
Spst2g00735 680 SUPERFAMILY Protein kinase-like (PK-like) 293 586 IPR011009 -
Spst2g00735 680 SMART serkin_6 313 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00735 680 Pfam Protein tyrosine and serine/threonine kinase 316 585 IPR001245 GO:0004672|GO:0006468
Spst2g00735 680 CDD EGF 192 219 - -
Spst2g00735 680 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 658 IPR044652 GO:0004672
Spst2g00735 680 ProSiteProfiles Protein kinase domain profile. 313 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00735 680 Gene3D Phosphorylase Kinase; domain 1 275 388 - -
Spst2g00735 680 FunFam Wall-associated receptor kinase-like 20 389 598 - -
Spst2g00735 680 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00735 Spst-Chr2 6129110 6132882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00735 1 678 Receptor kinase-like Gene Family AT2G23450 56.250 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Spst2g00735 PK_Tyr_Ser-Thr 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00735 - - vum:124829194 1125.92