Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst2g00735 | ATGTTTCTTCTGCACCGTACAAATCTCGTTATAGTCCTCGCGATCTTGATAGCCTGCACAACAAAAGCGCAAAACCTCACCTGTAATAGCCATTGCGGGAAGCTAACTCTTCAGTTCCCTTTTGGGTTCTCCGATGGTTGTAAAATCAGACTAAACTGTTCCGACAACCAAGTCCAACTTGACGAATTTCTGGTCCAAAACGTTACCAACAGCAGCATATTCGTCAATCTCCCTGCAAAATGCAAACGCAGCATGCAATCCATTGAGCCACTTTTCAGTAGGAATTTTGCCCCCTCGGTTAACAACAGCTTTCTGGTGCAAGGTTGCAGCGAGGTGTTTGGTGGGTGTGTTATTCCTGCTTCGAATTTTGTGGAGAGCTGCGATAAGCAAAGTGGTAACATCAGTTGCTTTTCGAAACAAGATGCGGGGGATGTTGTGACATACCAAGATTTGGAAGAAACTAAGTGTAAATATTTGTTCTCTGCGGTTTCTTTTGGACAGAGGGAGGAGGAGATTGCGCTGCAGTTTCAGGTGGTTGAGTTGGGGTGGTGGCTTCATGGACACTGTGATGAATGTTCTGATAACGCTACCTGCACACAGGTCCCTCACCAAGAAGGGTTTCGATGCCAGTGTATTCAGGGTTTCACCGGCGACGGCTTCAGGAGCGGCACCGGTTGCCTGAAAGCTTCGACTTCAAGTTGCAGTGCTTCAACACTAACTTCATGTGGAAAAGCAACCAAAATCGGTGTTGCTGTTGGAGCGATCGTAGCTGGAGCATTGGTGGTGGCTGGTCTGTTTCTTCTATGCTACTGTGCCAGGCGCCGTTCTATTTGGTTGGGAAAGCATACCAGAGTGAAGCGCCAATTACGTGAAGCTGCAGGCAACTCTAGTATACCTTTCTATCCCTACAAAGAAGTAGAAAAAGCCACAAACTCTTTCTCTGAGAAACACATGCTGGGAACAGGGGCATTTGGTACAGTTTATGCAGGAAAATTGCACAATGATGAATGGGTTGCTATAAAGAAGTTAAGGCAAAGAGACACCAACAGTGCTGACCAAGTCATGAATGAGATCAAGCTCCTTTCTTCAGTGAGTCACCCAAATTTAGTTCGCCTCTTAGGCTGCTGCATAGAGAAGGGAGAGCAGATCCTTGTTTATGAATATATGCAAAATGGAACGCTTTCTCAGCACTTGCAAAGAGAGAGGAGTGAGGGACTACCATGGACAATAAGACTTACCATTGCTACTGAAACTGCTAATGCTATAGCATATCTCCATTCCGCAATTCATCCCCCAATTTACCACAGAGACATAAAATCTAGTAATATACTTTTGGATTATCACTTCAAATCTAAGATAGCTGATTTTGGGCTTTCTAGGCTTGGCATGACAGAAACTTCTCATATCTCAACCGCCCCACAAGGAACTCCCGGTTATGTCGATCCCCAATACCACCAGAACTTCCATCTTTCTGATAAAAGTGATGTGTACAGTTTTGGAGTGGTCTTGGTAGAGATAATAACTGCCATGAAAGTGGTTGATTTTTCTCGACCTCGGAGTGAGGTTAACTTAGCTGCACTTGCCGTAGATAGGATTAGGAGGGGTGCTGTAGATGATATCATAGATCCCTTCCTTGAACCACATAGAGATGCTTGGACATTATATTCCATTCATAAGGTAGCTGAGCTTGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACTATGATGGAAGTGGCAGAGGAGCTAGAACACATTAAACGAAGTGGATGGGCAACTACGGAGGAAACTGTCATGGCTTCATCGATTGGGTCCACTTGTTCATCACCTCGCAATGGAAGTGAGAAGTCACTGAGTGGTATTAAAAAGGCTGGCCATGGGAGTGAGAGATTGATAGTTCCACAAAAGATTGAGAGATTTTTTCATTCTGTGGAGGTGAAGGACAGCTCCCCTGTATCAGTTCATGATCCTATTCATTGGTCAAGTGGACACAGCTCACCTTCATCAAACAGCTTGTTGGTAAACGTCATCCCTTGA | 2043 | 0.4484 | MFLLHRTNLVIVLAILIACTTKAQNLTCNSHCGKLTLQFPFGFSDGCKIRLNCSDNQVQLDEFLVQNVTNSSIFVNLPAKCKRSMQSIEPLFSRNFAPSVNNSFLVQGCSEVFGGCVIPASNFVESCDKQSGNISCFSKQDAGDVVTYQDLEETKCKYLFSAVSFGQREEEIALQFQVVELGWWLHGHCDECSDNATCTQVPHQEGFRCQCIQGFTGDGFRSGTGCLKASTSSCSASTLTSCGKATKIGVAVGAIVAGALVVAGLFLLCYCARRRSIWLGKHTRVKRQLREAAGNSSIPFYPYKEVEKATNSFSEKHMLGTGAFGTVYAGKLHNDEWVAIKKLRQRDTNSADQVMNEIKLLSSVSHPNLVRLLGCCIEKGEQILVYEYMQNGTLSQHLQRERSEGLPWTIRLTIATETANAIAYLHSAIHPPIYHRDIKSSNILLDYHFKSKIADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFSRPRSEVNLAALAVDRIRRGAVDDIIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPTMMEVAEELEHIKRSGWATTEETVMASSIGSTCSSPRNGSEKSLSGIKKAGHGSERLIVPQKIERFFHSVEVKDSSPVSVHDPIHWSSGHSSPSSNSLLVNVIP | 680 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst2g00735 | 680 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 433 | 445 | IPR008271 | GO:0004672|GO:0006468 | |
Spst2g00735 | 680 | Gene3D | Transferase(Phosphotransferase) domain 1 | 389 | 606 | - | - | |
Spst2g00735 | 680 | ProSiteProfiles | EGF-like domain profile. | 185 | 221 | IPR000742 | - | |
Spst2g00735 | 680 | Gene3D | Laminin | 189 | 222 | - | - | |
Spst2g00735 | 680 | FunFam | Wall-associated receptor kinase-like 14 | 281 | 388 | - | - | |
Spst2g00735 | 680 | ProSitePatterns | Protein kinases ATP-binding region signature. | 319 | 342 | IPR017441 | GO:0005524 | |
Spst2g00735 | 680 | MobiDBLite | consensus disorder prediction | 660 | 680 | - | - | |
Spst2g00735 | 680 | SUPERFAMILY | Protein kinase-like (PK-like) | 293 | 586 | IPR011009 | - | |
Spst2g00735 | 680 | SMART | serkin_6 | 313 | 594 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst2g00735 | 680 | Pfam | Protein tyrosine and serine/threonine kinase | 316 | 585 | IPR001245 | GO:0004672|GO:0006468 | |
Spst2g00735 | 680 | CDD | EGF | 192 | 219 | - | - | |
Spst2g00735 | 680 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 11 | 658 | IPR044652 | GO:0004672 | |
Spst2g00735 | 680 | ProSiteProfiles | Protein kinase domain profile. | 313 | 590 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst2g00735 | 680 | Gene3D | Phosphorylase Kinase; domain 1 | 275 | 388 | - | - | |
Spst2g00735 | 680 | FunFam | Wall-associated receptor kinase-like 20 | 389 | 598 | - | - | |
Spst2g00735 | 680 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst2g00735 | Spst-Chr2 | 6129110 | 6132882 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst2g00735 | 1 | 678 | Receptor kinase-like Gene Family | AT2G23450 | 56.250 | 0.0 | 739 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Spst2g00735 | PK_Tyr_Ser-Thr | 2.2e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst2g00735 | - | - | vum:124829194 | 1125.92 |