Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00729 ATGATGGATATTTTCCAATTCCAAACTCTCATTTCCATCATTCTTGCTCTCTCAGTAGGTGTCTTGATTTATCGTTTGAAGAGAACACATAGTGGTCATGAAAAGATCTGCAGTGCACCTCAAGCAGGAGGAGCATGGCCTATTATTGGCCATTTACACCTCTTTGGGAGTCATCAACATACACACAAAACACTTGGGATGATGGCTGAGAAACATGGACCAATTTTCACAATAAAACTTGGTTCATACAAAGTTCTGGTACTGAGTAGCTGGGAGATGGCCAAGGAGTGTTTCACTGTCCATGACAGAGCCTTCTCCACCAGGCCCTGTGTTGCAGCCTCAAAGCTAATGGGCTACAACTATGCCATGTTTGGCTTCACTCCTTATGGTCCTTACTGGCGTGAGATGAGGAAATTAGCCACTATTGAGCTTCTGTCTAACCACCGACTTGAACTGCTGAAGAGCACAAGAACATCTGAGTTAGAAGCAGCAACAAAAGATCTTTACAAGTTATGGGCAAGAGAAGGTTGTCCAAATGGAGGGATTTTGGTAGATATGAAGCAGTGGTTTGGGGATTTAGCTCATAATATTGTTCTGAGAATGGTGAAAGGGAAGCCATACTATGGGGCCAGTGATGATTATGCAGAAGCAAAAAGGTACAAGAAAACTATGAGAGACTGCATGAGTTTGTTTGGGGTGTTCGTGTTATCTGATGCTATTCCGTTTCTAAGGTGGTTGGACATTAACGGATATGAAAAGGCAATGAAGAGAACTGCAAGTGAATTGGACCCTCTGGTGGAAGGATGGCTAGAGGAACACAAAAGGGAAAGAGGTTTTAGTGTGAACGGAAAGGAAGAACAGGATTTCATGGACGTCATGCTGAATGTTCTGCAGGATAAAGAGATTTCTGGTTATGATTCAGATACCGTTATCAAGGCTACTTGCCTGAATCTGATATTAGCAGGAAGCGACACCACCATGATTACTCTGATATGGGTGCTGTCTCTGCTACTCAACCATCAAATTGAACTGGAAAAGGCCCAAGATGAATTAGACACGTATATTGGGAAGGATAGGAACGTGGAAGAATCTGACATAACGAAGTTGGTCTACCTCCAAGCCATTGTCAAGGAAACTATGCGCATGTATCCACCAAGTCCCCTTATCACCCTTCGTGCAGCCATGGAAGACTGCACCTTTTCATGCGGTTCTCACGTTCCTGCTGGCACACATTTGATGGTGAATGCCTGGAAGATCCACCGGGATGGTCGTGTTTGGAGTGATCCTCATGATTTCAAGCCTGAAAGGTTTTTGACAAGCCACAATGATGTTGATGTGAAGGGTAAAAACTATGAGTTTGTCCCTTTTGGTTCTGGAAGGAGAGCATGCCCTGGGGATTCGCTTGCTCTGCGTGTGGTGCACTTGACCTTGGCTAGATTGTTACACTCTTTCACCGTTGCTTTACCTTCAAATAAAGTTGTGGACATGACAGAGAGCGTAGGACTCACAAATTTAAAAGCAACCCCACTTGAAGTTCTCCTAACTCCACGTCTAGACACCAAACTTTATGAAGACTAG 1578 0.4404 MMDIFQFQTLISIILALSVGVLIYRLKRTHSGHEKICSAPQAGGAWPIIGHLHLFGSHQHTHKTLGMMAEKHGPIFTIKLGSYKVLVLSSWEMAKECFTVHDRAFSTRPCVAASKLMGYNYAMFGFTPYGPYWREMRKLATIELLSNHRLELLKSTRTSELEAATKDLYKLWAREGCPNGGILVDMKQWFGDLAHNIVLRMVKGKPYYGASDDYAEAKRYKKTMRDCMSLFGVFVLSDAIPFLRWLDINGYEKAMKRTASELDPLVEGWLEEHKRERGFSVNGKEEQDFMDVMLNVLQDKEISGYDSDTVIKATCLNLILAGSDTTMITLIWVLSLLLNHQIELEKAQDELDTYIGKDRNVEESDITKLVYLQAIVKETMRMYPPSPLITLRAAMEDCTFSCGSHVPAGTHLMVNAWKIHRDGRVWSDPHDFKPERFLTSHNDVDVKGKNYEFVPFGSGRRACPGDSLALRVVHLTLARLLHSFTVALPSNKVVDMTESVGLTNLKATPLEVLLTPRLDTKLYED 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00729 525 PANTHER CYTOCHROME P450 82C3-RELATED 20 523 - -
Spst2g00729 525 Pfam Cytochrome P450 40 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00729 525 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00729 525 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00729 525 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00729 525 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00729 525 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00729 525 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00729 525 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00729 525 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00729 525 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00729 525 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00729 525 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00729 525 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00729 525 FunFam Cytochrome P450 82C4 29 515 - -
Spst2g00729 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Spst2g00729 525 SUPERFAMILY Cytochrome P450 45 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00729 525 Gene3D Cytochrome P450 35 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00729 525 Coils Coil 337 357 - -
Spst2g00729 525 CDD CYP82 73 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00729 Spst-Chr2 6090903 6094524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00729 39 523 Cytochrome P450 AT4G31940 52.716 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00729 - - gmx:606549 951.044