Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00728 ATGGTCATGGATGTTTTCCAGCTCCAACTAATTTCAGGCATTATTGCCTTGTTGGTAGGTGTCTTGCTTTATCAGTTAAAGAAGACACATGGTCCTAATGCAAAGATCTGCACTGTGCCTCAAGCAGCAGGAGCATGGCCTATTGTTGGTCATTTGCACCACTTTGGGGCTCATCAACTTACACACAAGACACTTGGGATGATGGCTGACAAACATGGACCAATTTTCACAATTAAACTTGGTTCATACAAAGTTCTCGTGTTGAGTAGTTGGGAGATGGTAAAAGAGTGTTTCACTGTCCATGATAAAGCATTCTCCACCAGGCCCTCTGTTGCAGCCTCAAAGCTCATGACCTACAACTCGGCAATGTTTGGCTTCGCTCCTCATGGACCCTACTGGCGTGAGATGAGGAAATTTACCACTGTTGAGCTTCTCTCTAACCAAAGGCTTGAACTGCTCAAGGATACAAGAACGTCTGAGTTAGAGGCTTCAACAAGGAAGGTTTACAAGTTATGGTCAACAGAAGGCTGTCCAAAGGGAGGGGTTTTAGTAGACATGAAACAGTGGTTTGGGGATTTGACGCATAATATTATTCTGAGAATGGTGGGAGGGAAGCCATATTATGGGGATAGTACTGATGATTGTGCAGAAGGTGAAGCAAGAAGGTATAAGAAAGCTATGAGGGACTTCATGAGTTTGTTTGGGGTGTCTGTGTTATCCGATGCTATTCCATTTCTGGGGTGGCTAGATAACAATGGATACAAAAAGGCTATGAAGAGAACAGCTAGTGAAATAGACACTTTGGTTGGAGGGTGGCTGGAGGAACACAAAAGAAAAAGAGTTTCGAGTACTAATGGAAAGGATGAACAAGATGTCATGGATGTCATGCTGAATGTTCTGCAGGATCTTAAGGTTTCCGGTTATGATTCTGACACCATCATCAAGGCTACTTCCCTGAATCTGATTTTGGCAGGAGGGGACAGTATCATGGTGGCTCTAACATGGGCCCTATCTCTGCTACTAAACAATAAAATGGAGCTTAAAAAGGCCCAAGATGAATTGGACACTCATATTGGGAAGGACAAGAAGGTTGAAGAATCTGACATAAAGAAGCTAGTCTACATCCAAGCCATTGTAAAGGAAAGTATGCGGCTGTATCCACCAAGTCCTATTATCACCCTTCGTGCAGCAATGGAAGAGTGCACATTTTCATGCGGCTATCATATTCCTGCTGGCACACGTTTAATTGTGAATACTTGGAAGCTCCATAGAGATGGTCGTGTTTGGCCTGATCCTGATGATTTCAAGCCTGAAAGGTTCTTGACAAGCCACAAAGATGTTGATGTAAAGGGTCAGAACCATGAGCTCGTCCCTTTTGGTTCCGGAAGAAGAGCATGCCCTGGGGTCTCACTGGCTCTGCGTGTTGTGCACTTGGTCTTGGCTAGACTCTTACACTCTTTCAATGTTGCTTCGCCTTCAAATCAAGGTGTAGACATGACAGAAAGCATTGGACTCACAAATTTAAAAGCAACCCCACTTGAAGTTCTTCTAACTCCACGTTTAGATACAAATCTTTACGAGGACTAG 1587 0.4386 MVMDVFQLQLISGIIALLVGVLLYQLKKTHGPNAKICTVPQAAGAWPIVGHLHHFGAHQLTHKTLGMMADKHGPIFTIKLGSYKVLVLSSWEMVKECFTVHDKAFSTRPSVAASKLMTYNSAMFGFAPHGPYWREMRKFTTVELLSNQRLELLKDTRTSELEASTRKVYKLWSTEGCPKGGVLVDMKQWFGDLTHNIILRMVGGKPYYGDSTDDCAEGEARRYKKAMRDFMSLFGVSVLSDAIPFLGWLDNNGYKKAMKRTASEIDTLVGGWLEEHKRKRVSSTNGKDEQDVMDVMLNVLQDLKVSGYDSDTIIKATSLNLILAGGDSIMVALTWALSLLLNNKMELKKAQDELDTHIGKDKKVEESDIKKLVYIQAIVKESMRLYPPSPIITLRAAMEECTFSCGYHIPAGTRLIVNTWKLHRDGRVWPDPDDFKPERFLTSHKDVDVKGQNHELVPFGSGRRACPGVSLALRVVHLVLARLLHSFNVASPSNQGVDMTESIGLTNLKATPLEVLLTPRLDTNLYED 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00728 528 Gene3D Cytochrome P450 35 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00728 528 FunFam Cytochrome P450 82C4 29 518 - -
Spst2g00728 528 Pfam Cytochrome P450 41 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00728 528 CDD CYP82 73 520 - -
Spst2g00728 528 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00728 528 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00728 528 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00728 528 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00728 528 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00728 528 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00728 528 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00728 528 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00728 528 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00728 528 PANTHER CYTOCHROME P450 82C3-RELATED 20 526 - -
Spst2g00728 528 SUPERFAMILY Cytochrome P450 45 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00728 528 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00728 528 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00728 528 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00728 528 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00728 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00728 Spst-Chr2 6088610 6090488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00728 40 526 Cytochrome P450 AT4G31940 51.521 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00728 - - gmx:106794123 956.822