Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00715 ATGGATCGGCCGGCCACAGGAATAGGTTTGGACATGCCTATCATGCATGATAGTGACCGCTACGATTTCGTTCGCGATATTGGATCTGGAAATTTCGGCGTGGCTAGACTTATGAGGGATAAGCAAACGCAAGAGCTTGTTGCTGTCAAGTATATAGAACGCGGGAAAAAGATTGATGAAAATGTTAAAAGAGAAATCATTAATCACAGGTCTCTAAGACATCCTAACATTATCAGGTTTAAGGAGGTCATTTTAACACCTACCCATCTGGCCATTGTAATGGAATATGCATCTGGAGGAGAACTATTTAATCGAATTAGCAATGCAGGGCGTTTTACTGAGGATGAGGCTCGTTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGTCATGCAATGGGTAAGGCTGCATATAATTATCGTCCATACCTTTGCATAGCGAGGAAGGAAGTGTGTCACCGGGACTTGAAGTTGGAAAACACTTTGTTGGATGGAAGCCCAGCAGTCCATTTGAAGATATGTGATTTTGGATATTCCAAGTCTTCGATGCTTCATTCACAACCTAACTCAACTGTGGGAACCCCTGCATATATTGCTCCAGAAGTATTGCTGAAGCAAGAGTATGATGGCAAGATTGCGGATGTCTGGTCATGTGGAGTAACCTTATATGTGATGCTAGTGGGTTCATATCCTTTTGAAGATCCTGAAGATCCAAGGGATTTCCGGAGGACAATTCAGAGGGTTCTCGGTGTCCAGTATTCCATTCCAGATCATATACAAATATCTCCTGAGTGTAGCCACCTTATCTCAAGGATATTTGTTTTTGATCCTGCAGAGAGAATCACTATTCCTGAAATATTGAAAAATGAATGGTTTCTGAAGAATCTCCCTCCTTACTTGATGGATGAAAAGATCATGGGTAAGCAATTTGTAGAGTCAGATCAACCCATCCAGAGCATTGATACAATCATGCAGATAATTTTAGAAGCTACCTTACCACCAGAAGGGACCTATTCTTTAGACCAGTTTATGGCTGATAACATAATAGATGACATGGATGAATCTGACTCTGACTTCGAGCAAGATGTAGAAAGCAGTGGGGAAATAGTGTATGCCATGTAA 1125 0.4142 MDRPATGIGLDMPIMHDSDRYDFVRDIGSGNFGVARLMRDKQTQELVAVKYIERGKKIDENVKREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFNRISNAGRFTEDEARFFFQQLISGVSYCHAMGKAAYNYRPYLCIARKEVCHRDLKLENTLLDGSPAVHLKICDFGYSKSSMLHSQPNSTVGTPAYIAPEVLLKQEYDGKIADVWSCGVTLYVMLVGSYPFEDPEDPRDFRRTIQRVLGVQYSIPDHIQISPECSHLISRIFVFDPAERITIPEILKNEWFLKNLPPYLMDEKIMGKQFVESDQPIQSIDTIMQIILEATLPPEGTYSLDQFMADNIIDDMDESDSDFEQDVESSGEIVYAM 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00715 374 FunFam Serine/threonine-protein kinase SRK2A 97 301 - -
Spst2g00715 374 Gene3D Transferase(Phosphotransferase) domain 1 97 299 - -
Spst2g00715 374 FunFam Serine/threonine-protein kinase SRK2E 12 96 - -
Spst2g00715 374 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Spst2g00715 374 Pfam Protein kinase domain 21 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00715 374 SMART serkin_6 21 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00715 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Spst2g00715 374 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Spst2g00715 374 ProSiteProfiles Protein kinase domain profile. 21 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00715 374 PANTHER SERINE/THREONINE KINASE 20 319 - -
Spst2g00715 374 SUPERFAMILY Protein kinase-like (PK-like) 19 318 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00715 Spst-Chr2 5979826 5985497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00715 20 297 CBL-interacting serine-threonine protein kinases AT5G25110 40.484 6.19e-63 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Spst2g00715 Pkinase 4.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00715 K14498 - gmx:100783967 656.366