Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00711 ATGTCATCATCATCGAATTCGCCGTGCGCGGCGTGTAAGTTTCTGAGGCGAAAGTGCACGCAGGAGTGCGTGTTCGCGCCGTATTTTCCGCCGGACAACCCTAAGAGGTTCGCTGACGTGCACAAGGTTTTCGGCGCCAGCAACGTGGCCAAGCTTCTCAACGAGCTCAGCGCCGCGCAACGAGACGACGCCGTAAAGTCTCTTGCGTACGAGGCCGATGCACGTCTGAGGGATCCTGTCTACGGCTGCGTGGGGCTCATCTCCGTCCTTCAACACAAACTCCGGCAGATCCAAGTAGAACTCAACAATGCAAAGAAGGAGCTCGCAACCTACATCGGGCCACAAGCTTTTCAAGGCTTACCTTCCCCTATTCTCCAACAGCACCCCAACAACCCTTTTTCCGGTTCCGTTTATGGTAATATGGCAGGCATGGCAGGCGTGACGGCTGCCGCTCACGGTGGACAGCTGGTGATTCGCGACTCTCAACCGCCACAACAGTATCAGATCTTGGAGGCTCAGCAGTTAGCTGCGGCTGTGGCGGCAAGGGAGCAGCAGGAGTTGTTCAGGAGTTACGAACATCAACAGCAGGAGTTTATGCGATTCAGTGGTGGGTTCGATGTGGGTTCGGCTTCTTCTGCTGGTGGGTTCAGCCAGATGTCCCCAGCTGCTGTTTCAGCTGATCAGTTGTCTCCTTCGTTGGCATTGGGATCCTTCGATAACGCTTATCACATGCAGCAACCGCAGCAGGGAGAGCCCCATCCTCATTCTCATCCCCACAACATTCCTTTTGAGGCTCAGCTATTGCTCCCACCTCAACAGAAACAAGCGCAGCAACAAACCCAACAGTCACAACTTCCCCTTCACCAACAACAGTCTGAAAGCGAGGAGTGTAGAAGTCTTGGTCCATCCTGTTGA 915 0.5454 MSSSSNSPCAACKFLRRKCTQECVFAPYFPPDNPKRFADVHKVFGASNVAKLLNELSAAQRDDAVKSLAYEADARLRDPVYGCVGLISVLQHKLRQIQVELNNAKKELATYIGPQAFQGLPSPILQQHPNNPFSGSVYGNMAGMAGVTAAAHGGQLVIRDSQPPQQYQILEAQQLAAAVAAREQQELFRSYEHQQQEFMRFSGGFDVGSASSAGGFSQMSPAAVSADQLSPSLALGSFDNAYHMQQPQQGEPHPHSHPHNIPFEAQLLLPPQQKQAQQQTQQSQLPLHQQQSESEECRSLGPSC 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00711 304 Coils Coil 87 107 - -
Spst2g00711 304 MobiDBLite consensus disorder prediction 270 304 - -
Spst2g00711 304 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 290 - -
Spst2g00711 304 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Spst2g00711 304 MobiDBLite consensus disorder prediction 244 304 - -
Spst2g00711 304 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00711 Spst-Chr2 5934261 5935175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00711 3 243 AS2 family AT5G66870 50.916 7.49e-73 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Spst2g00711 LOB 1.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00711 - - gmx:102664012 452.595