Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00670 ATGGACTGGGTTCGAGGAGAGTCAATCGGCAGTGGAACCTTCGCCACCGTCAACATCGCCGTGCCCACAAACGGCTCCACTCAGTTCTCTTCTCTCACCGCCGTCAAATCCTCTGATTCCCACAACGCGGGTTTGCTGAAAAAGGAGAAGGAGGTCCTCGATCGTCTTGGCTCTTCCCCTTACATCATCAACTGTTTTGGTCACGATCACACCGTTGAAAACGGCAACGAGTTCTACAACGTGTTCCTAGAATACGCCGCCGGAGGTTCCCTCGCCAACCAGGTCAGAAAACACGGCGGAAGGCTCCCGGAGCCTTTCGCGCGGCGATGCACGAGGTCCGTCGCGGAAGGGCTCAAACATATTCACAACCGCGGTTTCGTTCACTGTGACGTGAAGCTTCAAAACGTTCTCGTCTTCGATAACGGCGAGGTGAAAATCGCGGACTTCGGGCTCGCGAAGGAGAAGGGGGAGAAACAGGGGAAGTACGAATGCAGGGGAACGCCGTTGTTTATGTCGCCGGAATCGGTGATCGCCAATGAGTATGAGTCGCCGGCGGATATTTGGGCTTTGGGCTGCGCCGTCGTGGAGATGGTGACCGGAAAGCCTGCATGGGATGTTCGCAACGGGTCGAATATTTGGTCGTTATTGATGCGTATTGGAGTGGGAGAAGAATTGCCGAAGATTCCAGAAGAATTTTCGGAAGAGGGGAAGGACTTTTTGAGAAAGTGTTTTGTTAAGGATCCCACAAAGAGGTGGAGCGCTGAGATGCTTTTGAAGCACCCTTTCATCAACGTTGACACTTCTTCGTTCGAGAAAGTTAATGAGCCGTTACAGTCGCCGTCACCGAGGACCCACTTCGATTTCCATCACTGGGCTTCCCCTTCCACCGTAACGGCTTCGCTCCCGTCTTCCCTGCACGGCGCCTGGTGTGAGTGGAGTTCTAGGTCATCTTGTTCGCCGGAGAGTCGGCTCCAGCAACTTGTCACCAATGAGAGGCCGGAGAATTGGTCAGAATCGGATGGCTGGACGTGCGTTAGGTGA 1041 0.5418 MDWVRGESIGSGTFATVNIAVPTNGSTQFSSLTAVKSSDSHNAGLLKKEKEVLDRLGSSPYIINCFGHDHTVENGNEFYNVFLEYAAGGSLANQVRKHGGRLPEPFARRCTRSVAEGLKHIHNRGFVHCDVKLQNVLVFDNGEVKIADFGLAKEKGEKQGKYECRGTPLFMSPESVIANEYESPADIWALGCAVVEMVTGKPAWDVRNGSNIWSLLMRIGVGEELPKIPEEFSEEGKDFLRKCFVKDPTKRWSAEMLLKHPFINVDTSSFEKVNEPLQSPSPRTHFDFHHWASPSTVTASLPSSLHGAWCEWSSRSSCSPESRLQQLVTNERPENWSESDGWTCVR 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00670 346 SUPERFAMILY Protein kinase-like (PK-like) 3 306 IPR011009 -
Spst2g00670 346 ProSiteProfiles Protein kinase domain profile. 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00670 346 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 311 - -
Spst2g00670 346 Pfam Protein kinase domain 5 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00670 346 SMART serkin_6 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00670 346 CDD STKc_MAPKKK 2 263 - -
Spst2g00670 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Spst2g00670 346 Gene3D Transferase(Phosphotransferase) domain 1 2 301 - -
Spst2g00670 346 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Spst2g00670 346 FunFam Mitogen-activated protein kinase kinase kinase 17 2 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00670 Spst-Chr2 5569034 5570074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00670 1 346 MAP Kinase Kinase Kinase AT3G50310 51.397 7.75e-117 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst2g00670 Pkinase 4.6e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00670 - - gmx:100782937 556.214