Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00666 ATGAACGACCAGCTCTCCAACCCCACCTCCATCTTCGGCCTCCGTCTCTGGGTGGTGCTCGGCGTCTGTGTCGGCGCCGCCATCGTCCTCATCCTCTTCCTCATCTCCGTCTGGGTCGCCTTTAAGCGTTCCAAAGCCAACCCCGTTTCCATTCCCGACGTCTCCAAGGAGATCCAAGAAATCAGAGTCGACCACGCCCCCACCTCCAACCCAAACCTCCAACCCGACCCTTTTCCAGAACCCGACCCAGCTCCAACCACCGAGGACGAAACCAACCCCCTCGGTTACCCCAGAATCCAGTTCGAGATAGGGAAGAACCACCGAATCTCCTACCCCGAACGTGCCTTGCTTCGCTCATCTTCCAACGACCCTGCCAGTGCTGAGCATCGTCTCCTCGATCAGGTTCCCACTGTCATTCCCGAAGTTTCTCACTTGGGCTGGGGCCACTGGTACACTCTCCGGGAGCTAGAGGATTCCACCAACGCCTTCGCCCCTGAGAATGTTATTGGCGAAGGAGGTTATGGAATTGTTTATCACGGTATCTTGAACGACAATACTCATGTTGCCATCAAGAATTTGCTCAATAATAGGGGGCAAGCTGAGAAGGAGTTCAAGGTTGAAGTGGAAGCTATAGGACGAGTTCGCCACAAGAATTTAGTGAGGTTGCTTGGTTATTGTGCTGAAGGAGCTCATAGAATGCTCGTTTATGAGTTTGTGGACAATGGTAACTTGGAGCAGTGGCTACATGGGGATGTTGGCCCTTGCAGTCCTCTAACATGGGAAATTCGAATGAACATTATTCTAGGAACGGCTAAAGGGTTAACTTATCTACATGAGGGGTTGGAACCCAAAGTTGTTCACCGTGATATTAAATCAAGCAACATTTTGCTCAGTAAGCAGTGGAACGCAAAGGTTTCAGACTTCGGCCTCGCCAAACTCCTCGGCTCTGACAATAGTTATATTACAACCCGTGTCATGGGTACTTTTGGATATGTTGCTCCTGAATATGCAAGTACTGGAATGTTGAATGAACGAAGTGATGTTTATAGTTTTGGAATTCTTATTATGGAAGTACTTACAGGAAGAAATCCTGTTGATTATAGTCGGCCTCCAGAAGAGGTGAATCTAGTGGACTGGCTCAAGAAGATGGTTAGTAACAGAAATCCAGAGGGGGTTCTGGATCCCAAGCTTCCTGAGAAACCAACTTCAAGGGCACTGAAACGAGCCCTTCTTGTTGCCTTACGCTGCACTGATCCAAATGCACAAAAGCGACCTAAAATGGGGCATGTGATACACATGCTTGAAGCTGAAGACTCCCCTTACAAAGAGGATCGCAGAGCTAGAAGGGATGCGGGACAGTCGCCCAATGATAGAGTAGGGGATGGGTTGAAAGAGGAGGCAGCTGTATCATCAGTAGTTGATGATCTCAAGCTTGAAAATGGGATGAGTGCCGATGAGACAAGAACTAATCCTGAAATGGAAAAGCAATAA 1491 0.4889 MNDQLSNPTSIFGLRLWVVLGVCVGAAIVLILFLISVWVAFKRSKANPVSIPDVSKEIQEIRVDHAPTSNPNLQPDPFPEPDPAPTTEDETNPLGYPRIQFEIGKNHRISYPERALLRSSSNDPASAEHRLLDQVPTVIPEVSHLGWGHWYTLRELEDSTNAFAPENVIGEGGYGIVYHGILNDNTHVAIKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEFVDNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLSKQWNAKVSDFGLAKLLGSDNSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVLTGRNPVDYSRPPEEVNLVDWLKKMVSNRNPEGVLDPKLPEKPTSRALKRALLVALRCTDPNAQKRPKMGHVIHMLEAEDSPYKEDRRARRDAGQSPNDRVGDGLKEEAAVSSVVDDLKLENGMSADETRTNPEMEKQ 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00666 496 Gene3D Phosphorylase Kinase; domain 1 141 238 - -
Spst2g00666 496 Gene3D Transferase(Phosphotransferase) domain 1 239 451 - -
Spst2g00666 496 FunFam Probable serine/threonine-protein kinase At1g01540 143 238 - -
Spst2g00666 496 MobiDBLite consensus disorder prediction 72 86 - -
Spst2g00666 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Spst2g00666 496 MobiDBLite consensus disorder prediction 434 496 - -
Spst2g00666 496 MobiDBLite consensus disorder prediction 65 95 - -
Spst2g00666 496 FunFam Putative receptor-like serine/threonine-protein kinase 239 449 - -
Spst2g00666 496 SMART serkin_6 163 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00666 496 Pfam Protein kinase domain 166 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00666 496 SUPERFAMILY Protein kinase-like (PK-like) 139 435 IPR011009 -
Spst2g00666 496 ProSiteProfiles Protein kinase domain profile. 163 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00666 496 CDD STKc_IRAK 169 435 - -
Spst2g00666 496 MobiDBLite consensus disorder prediction 434 472 - -
Spst2g00666 496 ProSitePatterns Protein kinases ATP-binding region signature. 169 191 IPR017441 GO:0005524
Spst2g00666 496 PANTHER OS01G0323000 PROTEIN 1 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00666 Spst-Chr2 5534438 5536758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00666 140 492 Trihelix Transcription Factor Family AT1G70460 41.600 2.85e-88 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Spst2g00666 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00666 - - gmx:100797726 892.878