Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00655 ATGGAGGGTGAAGGAAGAAGAGAAGGAGGAGAGAGAGAAGCCACCAGGAAGCGAAGCGGCGTCGTGGTGGAGGGAGAGAGAAGATACAAAGGAATAAGGATGAGGAAGTGGGGCAAGTGGGTCGCGGAAATTAGGGAACCCAATAAGCGTTCAAGGATTTGGCTCGGTTCCTATTCCACCCCCGTCGCCGCCGCACGAGCCTACGACACCGCCGTTTTCTACCTTCGGGGACCCTCCGCGCGTCTCAACTTTCCCGACCTTCTTGTCGGAGAGGGCGCCGCCCTTGTCGCCGGTTGCGACATGTCAGCCGCCTCTATTAGGAAGAAGGCGACTGAGGTCGGTGCCAGAGTTGATGCTCTCCAGGCAACCCTCCACCACCACCACCACGACGTACCACCGCCGCCGCCGGAGCTTCTATTGCGCGGCGACAGAGGCGGGTCCGGCGACTTCGCGGTCGACCTAAACAAGATGCCCGAACCCGAGAGTGAGGACTGCGAGTGGGACGTGAATTGA 513 0.6023 MEGEGRREGGEREATRKRSGVVVEGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPDLLVGEGAALVAGCDMSAASIRKKATEVGARVDALQATLHHHHHDVPPPPPELLLRGDRGGSGDFAVDLNKMPEPESEDCEWDVN 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00655 170 SUPERFAMILY DNA-binding domain 28 86 IPR016177 GO:0003677
Spst2g00655 170 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Spst2g00655 170 PRINTS Ethylene responsive element binding protein signature 67 87 IPR001471 GO:0003700|GO:0006355
Spst2g00655 170 Pfam AP2 domain 28 77 IPR001471 GO:0003700|GO:0006355
Spst2g00655 170 FunFam Ethylene-responsive transcription factor 2 27 86 - -
Spst2g00655 170 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
Spst2g00655 170 Gene3D AP2/ERF domain 27 86 IPR036955 GO:0003700|GO:0006355
Spst2g00655 170 CDD AP2 28 87 IPR001471 GO:0003700|GO:0006355
Spst2g00655 170 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 16 164 - -
Spst2g00655 170 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00655 Spst-Chr2 5443006 5443518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00655 15 168 AP2-EREBP Transcription Factor Family AT5G67190 56.180 1.08e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Spst2g00655 AP2 1.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00655 K09286 - gmx:100527066 244.202