Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00650 ATGCCTGTGGAGCTCATCATGGGGTATAGGAACGACAATTTCGCCGAAGAGAATGCGGTTCGTGAAGCTGCGTCGGGGCTAGAGAGCGTTGAGAAGCTCATTAGGTTGCTGTCACACGCTCAACTGCAACAACAACAACAACATCAACAAGAACAGTCACAGAAATCCAATTCAAAGTCGTCCATGGAAATTGAATCCGATTACAGAGCTGTCGCTGACGTGGCAGTTTCCAAGTTCAAGAAGGTGATTTCGCTTCTGGGCCGAACCAGAACTGGCCACGCGCGTTTCAGAAGAGCCCCTGTGCCTCCCCCGCCTCCTTCCGAACCCAGATTCTACCGTGCAACGCCGCTGCAGCAGATCCCGCCACCCGCCGAACAACACCCTTTCACCCCCAAAAATGGAGTGATTGAGACAAAGGACTCTTCCAAGACCATCAATTTCTCCTATTCTAATTCCTTCGTCTCCTCCCTCACCGGTGACACCGACACTAAGCAGCCCACGTCGTCCTCGCCGGCCGCGGCACCTTTTCAGATCACGAATCTCTCTCAGGTCTCCTCCGCGGGAAAGCCTCCGCTTTCGTCGTCTTCGTTGAAGAGGAAGTGTAGCTCTGAAAACTTGGGTTCTGCCAAGTGTGGCAGTTCCTCTAGCAGATGTCATTGCTCAAAGAAGAGCAGAAAAATGAGGTTGAAGAGGGTGGTGAGGGTACCGGCAATAAGCTTGAAGATGGCTGATATTCCACCAGATGATTATTCTTGGAGAAAATACGGACAGAAACCCATTAAAGGATCTCCTCATCCAAGGGGTTATTACAAGTGCAGTAGTGTTAGAGGTTGTCCAGCGCGCAAGCATGTAGAGAGGGCTTTGGATGACCCTTCTATGTTGGTAGTCACTTATGAAGGTGTCAAAGTAGGCCTGATCTCATTTGTCTTGAGATTCTGA 939 0.5048 MPVELIMGYRNDNFAEENAVREAASGLESVEKLIRLLSHAQLQQQQQHQQEQSQKSNSKSSMEIESDYRAVADVAVSKFKKVISLLGRTRTGHARFRRAPVPPPPPSEPRFYRATPLQQIPPPAEQHPFTPKNGVIETKDSSKTINFSYSNSFVSSLTGDTDTKQPTSSSPAAAPFQITNLSQVSSAGKPPLSSSSLKRKCSSENLGSAKCGSSSSRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGVKVGLISFVLRF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00650 312 ProSiteProfiles WRKY domain profile. 241 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst2g00650 312 Pfam WRKY DNA -binding domain 248 300 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst2g00650 312 SMART WRKY_cls 246 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst2g00650 312 Gene3D WRKY domain 225 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst2g00650 312 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 21 301 IPR044810 GO:0003700
Spst2g00650 312 MobiDBLite consensus disorder prediction 41 64 - -
Spst2g00650 312 FunFam WRKY transcription factor 65 230 303 - -
Spst2g00650 312 SUPERFAMILY WRKY DNA-binding domain 243 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst2g00650 312 Pfam Plant zinc cluster domain 198 244 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00650 Spst-Chr2 5366466 5368620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00650 1 300 WRKY Transcription Factor Family AT2G24570 42.943 3.88e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst2g00650 WRKY 1.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00650 - - gmx:100804089 426.017