Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00645 ATGGAACCAGTTTCAGCTGATTCTTCGTCTCAGCCTACTCCTCCAGTTTCTAATACTGAAGGACACTCAACCAAAGTGTCTGGACAGATTAACAATGCACATGATTCACCATCATCGTTACCTGCTTCTGGAATATCATCATGGGCAAGAAATCTGAAACTCCCAGGCCTTGGCCTTGGACAGGCACAACAGGGTTCACAGACCGAGAACACAGGCATGTCAGCTTTTGCTCGCCTGACTAGTGGGCTTGGGATGCGAACGCAGTCAAATGCAACTGCTGCATCAGTCAATTCCGGACCTGAGCAATCTAATTTGATTGAATCCTTCACCAAAGGGTTGGTGGACTCTTCCAAAAGTGCAGTAAAAGCAGTGCAGGTCAAAGCACGCCATATTGTCTCTCAAAATAAACGTAGATACCAGGAAGATGGATTTGATTTGGATATGACATACATCACTGAAAATATAATTGCTATGGGATTTCCGGGTGGTGATTTTAGCTCTGGAATTTTTGGATACATTGAGGGGTTCTATCGTAATCACATGGAAGAGGTGATCAGGTTTTTTGAAACACATCATAAGGTTGCCACTTTCCCATTTAATGATCATAATTGCCCTCCTATTCAACTTATAGCATCATTTTGTCAAAGTGCATATTCATGGTTGAAGGAGGATATTCAAAACGTGGTGGTTGTTCATTGTAAAGCTGGTTTGGGGAGGACTGGACTGATGATATGTTGTCTTCTTTTGTTTCTTAAGGCAAGTCATGATATCAGCTTCAAAGACTTTTTCTTCCCAACTGCAGAGGAAGCCATTGATTACTTTAACCATAAAAGATGTGTAGATGGAAAGGCTCTAGTCCTCCCTAGTCAAATAAGATATGTAAAATACTTTGAACGGACTTTAACTCAATTCAATGGAGAAGTCCAGCCTGGACGAAGGTGCATACTAAGAGGGTTTCGGCTTCATAAGTGCCCTTATTGGGTTAGACCGTCTATTACAATTTCTGATCATAAGGGAATTCTTTTTGCCACAAGAAAGCATCCCAAAACAAAAGATCTAATGCCAGAAGATTTCTGGATCAGTGCACCCAAGAAAGGAATTGTAGTTTTTGCACTACCAGGAGAGCCTGGTCTAGCAGAGTTGGTAGGAGACTTCAAAATTCATTTTAATGATGGACATGGAGATTTCTACTGTTGGATGAATACAACAATGACAGAAAACCGAAAAATTTTGGATGGTTCAGATTTTGATGGTTTCGACAAGAGAAAGATCCCCACTCCAGGATTCCGGGTGGAAGTAGTCATGATAGACTATAATGGCACCCTACCTGCAAGAACAAAAGCCAATCCTGCCAGCAAAGGTTCTGATGGAAACACAAGCAATGCCCTACCTGGTCCAAAGCCTACTACCTCTAATTCAAGTGAGAGTAAACTCCCAAGAAATGGAGATGATGATGTATTCTCAGACAGTGATGAAGAGGAGACCCGAGATACACAAAGCAAGAAAGCTGCAACTGAGTACAAACTTATGGCACCTCATCAAGTATCTGAGGGGACAACAGAGCATGTAGGGACATTGACACACACAACGGATCGGTTGTCACTACAGCATGAGGAACGCATGCAAAACAATTCTTCTGAAGAATCTACCGCAGATAAACATCTTAAAGCTCATACAGGCAATGACAGTACAAACGTGGGATCTGTAGGGGCAAGTGACATCAAGGCAATTGCCGCAGATGCTTCAGTTTTTTCCTTCGGGGATGAAGACTTTGAAAGTGATTGA 1785 0.4224 MEPVSADSSSQPTPPVSNTEGHSTKVSGQINNAHDSPSSLPASGISSWARNLKLPGLGLGQAQQGSQTENTGMSAFARLTSGLGMRTQSNATAASVNSGPEQSNLIESFTKGLVDSSKSAVKAVQVKARHIVSQNKRRYQEDGFDLDMTYITENIIAMGFPGGDFSSGIFGYIEGFYRNHMEEVIRFFETHHKVATFPFNDHNCPPIQLIASFCQSAYSWLKEDIQNVVVVHCKAGLGRTGLMICCLLLFLKASHDISFKDFFFPTAEEAIDYFNHKRCVDGKALVLPSQIRYVKYFERTLTQFNGEVQPGRRCILRGFRLHKCPYWVRPSITISDHKGILFATRKHPKTKDLMPEDFWISAPKKGIVVFALPGEPGLAELVGDFKIHFNDGHGDFYCWMNTTMTENRKILDGSDFDGFDKRKIPTPGFRVEVVMIDYNGTLPARTKANPASKGSDGNTSNALPGPKPTTSNSSESKLPRNGDDDVFSDSDEEETRDTQSKKAATEYKLMAPHQVSEGTTEHVGTLTHTTDRLSLQHEERMQNNSSEESTADKHLKAHTGNDSTNVGSVGASDIKAIAADASVFSFGDEDFESD 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00645 594 MobiDBLite consensus disorder prediction 445 477 - -
Spst2g00645 594 ProSiteProfiles Phosphatase tensin-type domain profile. 137 304 IPR029023 -
Spst2g00645 594 MobiDBLite consensus disorder prediction 537 559 - -
Spst2g00645 594 MobiDBLite consensus disorder prediction 444 525 - -
Spst2g00645 594 Pfam Protein-tyrosine phosphatase 200 255 IPR000242 GO:0004725|GO:0006470
Spst2g00645 594 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 229 263 IPR000387 GO:0016311|GO:0016791
Spst2g00645 594 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 191 555 - -
Spst2g00645 594 MobiDBLite consensus disorder prediction 1 44 - -
Spst2g00645 594 ProSitePatterns Tyrosine specific protein phosphatases active site. 231 241 IPR016130 GO:0016311|GO:0016791
Spst2g00645 594 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 150 303 IPR029021 -
Spst2g00645 594 Gene3D Protein tyrosine phosphatase superfamily 122 307 IPR029021 -
Spst2g00645 594 ProSiteProfiles C2 tensin-type domain profile. 311 438 IPR014020 -
Spst2g00645 594 MobiDBLite consensus disorder prediction 537 568 - -
Spst2g00645 594 SMART PTEN_C2_2 309 437 IPR014020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00645 Spst-Chr2 5306408 5313148 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00645 35 594 Protein tyrosine phosphatase (PTP) family AT3G19420 56.739 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00645 K01110 - gmx:100801622 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00645 2 5306408 5313148 Spst2g00645 2 5306408 5313148 ECH
Spst2g00645 2 5306408 5313148 Spst10g01328 10 13803239 13808971 PCT