Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00642 ATGCCTCACCCACCCTCCCCCTCTTTCCTCCTCTGTCATGAACAACACTCCTCCTTCCAGCAACATTCTCCGACACTCCTCAACACCCAATTTTCACCTTCCATTTTTTCCGACAACCACTGCTTCTCCCAACACGACCACCTTCTCTCTCTACTCTCCAAAGAGACCAAAACGCATTTCACTCTCTCCCCTCGCCACGACGTCGTACGCTGGATTTCTACACTTTCCCACTTCCACGGTTTCGCTCCTCTCACCACCGTTCTCGCCGTTAACTACTTCCACAGGTTCGTTACCAGCATAAGCTTTCAGAGTGAAGATAAACCATGGATGACTCAACTAGCAGCCGTTGCTTGCGTCTCTCTCGCGGCCAAAGTGGAGGAGATACGAGTGCCGCTTCTTCTGGACTTGCAATTGGAGGAATCGAAATTCGTGTTTGAAGCGAAGACCATACAGGGAATGGAGCTCCTCGTGTTGTCCACTCTCGAATGGAAAATGAACCCTGTCACCCCAATCTCTTTCTTTCAACACGTTCTCACAAGGCTTGCTTTAAAGCGCCACTTGCTTTGGGAGTTTCAGTATAGGTGCGAACGAGTTCTTCTCTCTGTCATTGTGGATTCAAGGGTTATGAGTTACCTTCCTTCTACATTGGCTGCTGCTATAATGATCCACGTTATTAAAGAGATTGAACCGTTGAATGCTAAGGAGTACCGAAATCAGCTTCTTGGTTTACTCAAAAGTAGTGAGGAGCAAGTGAATGAGTGCTACAAACTGATACTGGGACTATTGGTTCGCTGTGAAGGAATTCACAATCTTGCTCAGAGGCGCAAACGTTTGGCTGAGCCAATTAGCCCTGGTGGAGTCATTGATGCATCTTTCAGTTGTGAAAATTCAAATGATTCATGGTCAGTGGCATCACTTTCTTTGGAGCCAGTGTTTAAGAGGAGAAAAGCTCAGGACCAGCAGATGCGGTTGCCTTCAGTGAATCGAGTGTCTATTAATGCTCTAAATACTCCTCGTTAA 1020 0.4696 MPHPPSPSFLLCHEQHSSFQQHSPTLLNTQFSPSIFSDNHCFSQHDHLLSLLSKETKTHFTLSPRHDVVRWISTLSHFHGFAPLTTVLAVNYFHRFVTSISFQSEDKPWMTQLAAVACVSLAAKVEEIRVPLLLDLQLEESKFVFEAKTIQGMELLVLSTLEWKMNPVTPISFFQHVLTRLALKRHLLWEFQYRCERVLLSVIVDSRVMSYLPSTLAAAIMIHVIKEIEPLNAKEYRNQLLGLLKSSEEQVNECYKLILGLLVRCEGIHNLAQRRKRLAEPISPGGVIDASFSCENSNDSWSVASLSLEPVFKRRKAQDQQMRLPSVNRVSINALNTPR 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00642 339 SUPERFAMILY Cyclin-like 53 166 IPR036915 -
Spst2g00642 339 FunFam D6-type cyclin 47 166 - -
Spst2g00642 339 SMART Cyclin_C_2 168 295 IPR004367 -
Spst2g00642 339 PANTHER CYCLINS 51 269 IPR039361 -
Spst2g00642 339 SUPERFAMILY Cyclin-like 150 263 IPR036915 -
Spst2g00642 339 CDD CYCLIN_AtCycD-like_rpt1 65 163 - -
Spst2g00642 339 Gene3D - 55 166 - -
Spst2g00642 339 CDD CYCLIN_AtCycD-like_rpt2 168 258 - -
Spst2g00642 339 SMART cyclin_7 70 159 IPR013763 -
Spst2g00642 339 Pfam Cyclin, C-terminal domain 168 272 IPR004367 -
Spst2g00642 339 Gene3D - 167 256 - -
Spst2g00642 339 FunFam CYCLIN D32 167 256 - -
Spst2g00642 339 Pfam Cyclin, N-terminal domain 55 166 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00642 Spst-Chr2 5295175 5296488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00642 45 329 Core Cell Cycle Gene Families AT5G67260 50.000 2.23e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00642 K14505 - gmx:100802683 500.745