Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00627 ATGCCTCCTCAAGACCGCCATCAGCCGCTGTTAGCGGAGGAGCAGGAAGAGACTGCATACGATTCCTCGGAGAAGGTTGTGGTGGTCGGAATCGATGAGCACGATGGCGACATGGAGGCGCCGCCGTTCTCATGGCGGAAGCTGTGGTTGTTCACGGGACCGGGATTTCTGATGAGCATCGCGTTCCTGGATCCCGGGAATTTGGAGGGGGATCTTCAGTCTGGGGCCATTGCTGGGTACTCGCTCTTGTGGCTGCTCATGTGGGCCACGGCTATGGGCCTCATCATCCAGCTTCTCTCGGCCCGCCTCGGCGTCGCCACTGGGAGACACTTAGCTGAACTGTGCAGGGATGAGTACCCCACATGGGCTAGGATTGTGCTCTGGCTCATGACTGAAATAGCTCTTATTGGCTCTGACATTCAAGAGGTTATTGGAAGCGCTATTGCTATCAGGATTCTCAGTAACGGCGTCGTTCCCCTTTGGGCTGGGGTCGTCGTTACTGCTTTAGACTGTTTCATTTTTCTCTTTCTTGAGAACTATGGTGTGAGGAAACTGGAGGCATTTTTTGCTGTTCTGATTGGTGTAATGGCTCTCTCATTTGCGTGGATGTTTGGTGAAGCAAAGCCTAATGGTGTTGATGTTCTTGTTGGTATTTTGGTTCCTAAACTTAGCTCCAGAACTATACAACAAGCTGTTGGAGTTGTCGGTTGCATTATTATGCCTCACAATGTGTTCTTGCATTCTGCGCTTGTTCAATCAAGGCAGGTTGACCCCAGCAAGAAAGGCCGTGTTCAGGAAGCACTTAATTACTACTCGATAGAGTCCACCATCGCCCTTGCAGTGTCCTTTGTGATTAATATATTTGTTACAACTGTGTTTGCAAAGGGGTTTTATGGTACTGAAATAGCAAACAACATTGGTCTTGGAAACGCAGGGCAGTACCTTCAGGAGAAGTATGGGGGTGGACTATTCCCAATCCTGTATATATGGGGTATTGGGTTGTTAGCAGCCGGCCAGAGTAGCACAATTACTGGTACATATGCTGGACAATTTATCATGGGGGGGTTTCTGAATTTAAAGTTGAAGAAGTGGATGAGGGCGTTGATTACACGAAGTTTTGCAATCATCCCAACCATGATAGTTGCTCTTATATTCGATACCTCAGAAGATTCATTAGATGTTCTGAATGAATGGCTTAATGTTCTCCAATCCGTTCAAATTCCCTTTGCACTCATTCCCTTGCTTTGCTTGGTGTCCAAAGAACAGATAATGGGCAGTTTCAGAATTGGTCCTGTCCTCAAGACTATTTCCTGGCTTGTGGCTGCTCTGGTGATTGTGATAAACGGTTATCTATTGCTGGAATTCTTCTCCTCTGAAGTGAATGGAGCAATGTTTGCCACTGTAGTGTTTGTAGTAACAGCTGCATATGTTGCATTTGTACTTTACCTTATTTCACGGGCCATTACTTATACACCGTGGCAAAGTTTAATCAGATCAAAGACAGTTGCTACCACAGACAATTGA 1524 0.4678 MPPQDRHQPLLAEEQEETAYDSSEKVVVVGIDEHDGDMEAPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATAMGLIIQLLSARLGVATGRHLAELCRDEYPTWARIVLWLMTEIALIGSDIQEVIGSAIAIRILSNGVVPLWAGVVVTALDCFIFLFLENYGVRKLEAFFAVLIGVMALSFAWMFGEAKPNGVDVLVGILVPKLSSRTIQQAVGVVGCIIMPHNVFLHSALVQSRQVDPSKKGRVQEALNYYSIESTIALAVSFVINIFVTTVFAKGFYGTEIANNIGLGNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLKLKKWMRALITRSFAIIPTMIVALIFDTSEDSLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGSFRIGPVLKTISWLVAALVIVINGYLLLEFFSSEVNGAMFATVVFVVTAAYVAFVLYLISRAITYTPWQSLIRSKTVATTDN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00627 507 Pfam Natural resistance-associated macrophage protein 69 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst2g00627 507 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst2g00627 507 NCBIfam Nramp family divalent metal transporter 53 422 - -
Spst2g00627 507 PRINTS Natural resistance-associated macrophage protein signature 182 203 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst2g00627 507 PRINTS Natural resistance-associated macrophage protein signature 400 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst2g00627 507 PRINTS Natural resistance-associated macrophage protein signature 231 254 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst2g00627 507 PRINTS Natural resistance-associated macrophage protein signature 127 153 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst2g00627 507 PRINTS Natural resistance-associated macrophage protein signature 338 357 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst2g00627 507 PRINTS Natural resistance-associated macrophage protein signature 157 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst2g00627 507 PRINTS Natural resistance-associated macrophage protein signature 366 383 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst2g00627 507 Hamap Divalent metal cation transporter MntH [mntH]. 34 456 IPR001046 GO:0016020|GO:0030001|GO:0046873
Spst2g00627 507 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 40 485 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00627 Spst-Chr2 5187730 5190720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00627 1 493 Inorganic Solute Cotransporters AT2G23150 78.486 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00627 K21398 - gmx:100807811 946.036