Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00621 ATGTTGCAGCTCTGCCTGAGGCCACTGGAGATGTGCTTTGGTGGTGGAGGCAACGAGGAGAACCTCCTTTGGGACACGGACCTTAAGCCCCACGCTTCAGGGAACTACTCAATTGCTGTGGTACAAGCCAACTCCTCCTTGGAAGACCAAGCACAAGTATTTACCTCTCCTTCAGCAACCTTCGTTGGCATATACGATGGCCACGGTGGACCCCAAGCTTCCCGTTTCATCACTAACCATCTCTTCCCCTTCCTCCGCCAGTTCACAACAGCGGAAGGTGGATTGTCGGAGGAGGTGATAAAGAAGGCGTTTGAGGCAACGGAGGAGGAGTTTTGTCGTTTTGTGAAACAATCATGGATTGCACGACCACAAATTGTTTCAGTGGGTTCGTGTTGTCTTCTGGGAGCGATTTCAAAGGATGTTCTATATGTTGCTAATCTGGGGGATTCGAGGGCGGTTTTGGGTCGGAAAGCGTTGGAAGGAGAGGTGAATTGTGGTGGAGTGGTGGCAGAGCGTTTGTCCACTGATCATAATGTTGGAGTGGAAGAGGTCAGAAAGGAGGTCGAGGCTCTTCATCCTGATGACGCACACATTGTGGTTTGCACTCGTGGAGTTTGGCGAATCAAGGGCATTATTCAGGTCTCAAGATCAATCGGAGATGTTTACCTGAAGAAACCAAAATTTGACACAAATCCTCTGTTCCAACAATCTGTATGCCCAGTATACTTGAAGAGACCTGTAATGACAGCTGAACCATCGATACTGACGCGGAAATTGAAGGAAGATGATCTGTTTTTGATCTTTGCATCAGATGGTCTTTGGGAGCATTTAACTGATGAAGCTGCCGTTGAAATCGTCTTCAGAAATCCCAGAATAGGAATAGCAAAAAGATTGGTGAGAGCTGCACTAGAAGAGGTTGCAAGGAAAAGAGAAATGAGATATGAAGACTTAAGGAAAGTTGAGAAAGGTCTAAGGCGCCATTTTCATGATGATATTACAGTGATAGTTCTATATCTGGATCATTCAAAAGAATTTGTAAATGGTAGGTTAAGACATAGAGGAGATTATGACTGCATTAATACTCCTATCGATATCTTCTCTCAGAGCGCAGCTGAAGTTGATCTTTAA 1128 0.4548 MLQLCLRPLEMCFGGGGNEENLLWDTDLKPHASGNYSIAVVQANSSLEDQAQVFTSPSATFVGIYDGHGGPQASRFITNHLFPFLRQFTTAEGGLSEEVIKKAFEATEEEFCRFVKQSWIARPQIVSVGSCCLLGAISKDVLYVANLGDSRAVLGRKALEGEVNCGGVVAERLSTDHNVGVEEVRKEVEALHPDDAHIVVCTRGVWRIKGIIQVSRSIGDVYLKKPKFDTNPLFQQSVCPVYLKRPVMTAEPSILTRKLKEDDLFLIFASDGLWEHLTDEAAVEIVFRNPRIGIAKRLVRAALEEVARKREMRYEDLRKVEKGLRRHFHDDITVIVLYLDHSKEFVNGRLRHRGDYDCINTPIDIFSQSAAEVDL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00621 375 ProSiteProfiles PPM-type phosphatase domain profile. 35 339 IPR001932 -
Spst2g00621 375 PANTHER PROTEIN PHOSPHATASE 36 337 IPR015655 GO:0004722|GO:0006470
Spst2g00621 375 CDD PP2Cc 42 339 IPR001932 -
Spst2g00621 375 FunFam Probable protein phosphatase 2C 42 26 347 - -
Spst2g00621 375 SUPERFAMILY PP2C-like 40 341 IPR036457 -
Spst2g00621 375 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Spst2g00621 375 Pfam Protein phosphatase 2C 57 304 IPR001932 -
Spst2g00621 375 SMART PP2C_4 28 337 IPR001932 -
Spst2g00621 375 Gene3D - 21 345 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00621 Spst-Chr2 5133253 5136722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00621 17 340 PP2C-type Phosphatase Gene Family AT3G51370 53.313 8.08e-131 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00621 - K01102 gmx:100802394 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g00621 2 5133253 5136722 Spst2g00621 2 5133253 5136722 ECH
Spst2g00621 2 5133253 5136722 Spst10g01276 10 13458196 13460685 PCT