Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00606 ATGAGTTGCAACGGCTGCCGCGTCCTTCGAAAGGGTTGCAGCGAGTCTTGTATCCTGCGGCCGTGTCTACAGTGGATCGATACACCCGAGGCCCAAGGTCACGCCACTGTCTTTGTAGCCAAATTCTTCGGTCGTGCCGACCTCATGTCCTTCATCTCCAACGTCCCTGAGGCCCAAAGGCCTGCTCTGTTTCAATCTTTGCTGTTTGAAGCATGCGGACGCACAGTGAATCCCGTCAACGGTGCTGTTGGTCTTTTATGGACCGGAAACTGGCACGTGTGCCAAGCCGCGGTTGAGACGGTGCTCCGTGGCGGCACCGTCAGGCCTGTGCCGGAGCTTCTTGGCCTAGAAGCTCCCACTCCCGACGACGCCTCCGAAGGCGAAGTTACTTGTACTGACAAACGGAGCGTCCGAGATCCGAACCCGATTTTCCGGTTGCCGAGTTCGACGTCTGATAAGGCTGCTTTCGTCGGTAAGCGCAAGCGATTGGAAGAGCTTGCAAAGCTGCAGACGGCAACCACTGATCTCAATCTCCGGTTGAAACCGAGTTTCCTGCAGAACGCGGCGAGCTTCGGTTGCCGGCAGGAAATTCGATGGCCGAGATCGCCGTCGATTAACTCGGAGGAGTCCGGGACGACGACGGCGTGCTTGGAGAGCGGGATCGGAGATCACTATGCTGCCGACGGAGACCGGAAAGTGCTGAACCTCTTCATTTGA 717 0.5746 MSCNGCRVLRKGCSESCILRPCLQWIDTPEAQGHATVFVAKFFGRADLMSFISNVPEAQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTVRPVPELLGLEAPTPDDASEGEVTCTDKRSVRDPNPIFRLPSSTSDKAAFVGKRKRLEELAKLQTATTDLNLRLKPSFLQNAASFGCRQEIRWPRSPSINSEESGTTTACLESGIGDHYAADGDRKVLNLFI 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00606 238 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Spst2g00606 238 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Spst2g00606 238 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00606 Spst-Chr2 4993858 4994666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00606 1 237 AS2 family AT3G49940 54.440 6.42e-82 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Spst2g00606 LOB 3.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00606 - - gmx:100802764 446.047