Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00601 ATGGGTGAAGAGCTAACACCTACTTTGGTTGTGAGAGACTTCGACCCTAATAGAGACAGAGAAAGAGTAGAAGCTGTTGAAAGGATATGTGAGGTTGGACCCAGTGACAAGCTTTCTCTCTTCACCGACATGCTGGGTGACCCAATCTGCAGGGTTCGCAATTCGCCTGCTTTTCTAATGCTGGTGGCTGAGATTGGCGAGGAGATAGTAGGAATGATAAGAGGATGCATAAAAACAGTGACATGCGGGAAAAGAGTATCCAGGAAAGGGAAACAAGACGACAGTAATGCCAAACACGTTCCAGTGTACACTAGAGTAGCGTACATATTAGGCCTTCGCGTTTCACCCAATCAACGGAGAATGGGAATAGGGTTGAAACTGGTGCATAGAATGGAGGCGTGGTTCAGGGATAACGGCGGGGAGTACTCCTACATGGCAACGGAAAACGACAATTTAGCTTCCGTTAAACTCTTCACCGACAAATGCGGGTATTCAAAGTTCCGTACCCCGTCCATCCTTGTCAACCCCGTTTTCGCCCACAGAGCCAGGGTGTCCCCAAAAGTCACAATCATAAGTCTTTCCCCTTCCGACGCGGAGGTTCTTTACCGTCGTCGGTTCGCCACGACGGAGTTCTTCCCGCGCGACATTGACTCCGTTCTGAAGAACAAGCTGAGTCTGGGGACTTTCCTGGCGGTCCCGCGAGGGTCATACAGGGCCGAGACATGGCCCGGGCCAGATCTTTTCCTGTCGGACCCACCAAAGTCCTGGGCCTTGGTGAGCGTGTGGAACTCCAAGGAGGTGTTCACGCTCGAGGTGCGGGGCGCGTCGTGCGTGAAGCGCACGCTCGCGAAGACGACGAGGGTGGTGGACCGGGCCCTGCCGTGGCTGAGGATACCCTCTATCCCGGACTTGTTTAGGCCGTTCGGGTTTCACTTCATGTACGGGCTTGGAGGGGAAGGCCCAGAGGCTGTGAAGATGGTGAAGGCCCTGTGTGGGTTCGCGCACAACCTCGCGATGGAAAAAGGGTGCAGGGTGGTGGCCACAGAAGTGTCACCAAACGAGCCCTTAAGGTTCGGGATACCCCACTGGAAGATGCTGTCGTGTGACGAAGATTTATGGTGTATGAAGCGGTTGGGTGAGGATTACAGTGACGGTTCCGTTGGTGACTGGACCAAATCTCAACCCGGCATGTCCATTTTTGTTGACCCGAGAGAGGTCTAA 1221 0.5373 MGEELTPTLVVRDFDPNRDRERVEAVERICEVGPSDKLSLFTDMLGDPICRVRNSPAFLMLVAEIGEEIVGMIRGCIKTVTCGKRVSRKGKQDDSNAKHVPVYTRVAYILGLRVSPNQRRMGIGLKLVHRMEAWFRDNGGEYSYMATENDNLASVKLFTDKCGYSKFRTPSILVNPVFAHRARVSPKVTIISLSPSDAEVLYRRRFATTEFFPRDIDSVLKNKLSLGTFLAVPRGSYRAETWPGPDLFLSDPPKSWALVSVWNSKEVFTLEVRGASCVKRTLAKTTRVVDRALPWLRIPSIPDLFRPFGFHFMYGLGGEGPEAVKMVKALCGFAHNLAMEKGCRVVATEVSPNEPLRFGIPHWKMLSCDEDLWCMKRLGEDYSDGSVGDWTKSQPGMSIFVDPREV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00601 406 CDD NAT_SF 60 142 - -
Spst2g00601 406 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 56 166 IPR016181 -
Spst2g00601 406 FunFam Probable N-acetyltransferase HLS1-like 18 171 - -
Spst2g00601 406 Gene3D - 18 173 - -
Spst2g00601 406 Pfam Acetyltransferase (GNAT) family 56 164 IPR000182 GO:0016747
Spst2g00601 406 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 183 IPR000182 GO:0016747
Spst2g00601 406 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00601 Spst-Chr2 4947254 4948743 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Spst2g00601 Acetyltransf_1 3.4e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00601 - - gmx:100800613 743.806