Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00599 ATGAAAGCTCGTCACTTGAGCTTCTTCTACTTCTGTATCTTCCTCCTCACACCGTTCCTATCCATCCCAGTCAACACAGAAAAAGGGGTCAACGATAGTACCAGCGCCAATGAATCTGGCACGAGAAGAATTCTGCACCAGCCATTGTTCCCCGCGAGTTCGGAACCACCGCCACCACTTCCGGTGGAGACCCCTCCCTCTCCGAACGGCGGCAACATCCCCTTCTTCCACGAGTACCCGGCGGGCCCTCCACCGGATCAGAACCAAGCAGCACCGTTCACTTCGAACACCACAATTGCAAACCCGACTGCAACACAACCCACAAAGGGAACAAAGAAAGTAGCAATCGCGATCTCAGTGGGGATTGTGACGCTTGGAATGCTCTCAGCGTTGGCCTTCTTTTTATACAAACACAGAGCTAAACACCCTCTGGAGACTCAAAAACTCGTCGCAGGGAGTGGGAATAACAATAACAATAACAGTATCCCAAACAGAAACGAGGTTGATTCTACTGCGCCACCGTCGAGTTTTCTCTACATTGGGACCGTGGAGCCCACGCGAGCCCCTATCAACGATTCGCGAGATAACAGAGATGTTAATAAGGGCAACAGATCCCCGTATCACAAGCTCAAGCGATCCGATCGCTACCGTCCGAGTCCCGAATTGCAGCCAATGCCACCGCTCAGTAAGCCACCCGACGGAAACTACCCGCCGGCTGTCTCCTCCTCCTCCTCGGACTCCGACGAGGAGAGCCGCGGCACGGCGTTTCACTCGCCGCAGAACTCGTCGGTCGATGGATACTACACGCCGGCTTCGCGGCAGAGCTCTCTCGTTAACGGTAGTCCCGCGAAGCGTGACGCAAATTCCACGCCCACACCCGTTGTTCCGTTTTCCAAGAGAACTTCGCCAAAGTCACGAGTTCCGGCACCCTCGCCGGAGATACGCCACGTCATCATTCCCTCTATAAAGCAGCCTCCACCATCGTCGCCGCCGCCACCAAAGCATTCCAGACAGCCGAAATTCTCCGCTCCTCCCCCACATCTTCAGTCAACAACCGACACTGTTTCACATGTGTCAAAGACTTCACTCAATCCTCCTCCTCCGCCACCTCCGCCACCGCCACCACCTCCACCGCCACCCCGAAAATCAGTGTCTCCGGCGGTTAGTGCTTCCTCTAATTCTGCATCTGTAAAGAGGCAGTCTTGGTCACCAGTTGAACGTAGTGTGACGAAAGGTTCAGAAGAGGTTGAACAAAGTGTGAGCTCTTCCGAGAGGCTTGAAGCCAATGACAGGGATGGAGCTAAACCAAAATTAAAGGCTCTGCATTGGGATAAAGTGCGTGCGACCTCAGACCGTGCTACAGTGTGGGACCAGATAAAATCAAGCTCGTTTCAGTTAAATGAGGACATGATGGAATCGTTGTTTGGATGCAAAGCCGCGAATTCTGCCCTTAAAGAACCTCCCAGGAAATCAGTTCTTCCTTCGGTTGATCACGAGAACAGGGTTTTAGACCCGAAGAAGTCACAGAACATAGCTATACTGCTCAGGGCTTTGAATGTGACCAGAGATGAGGTGTCTGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGCACTGAGCTATTGGAAACCCTAGTAAAGATGGCTCCAACTAAAGAGGAAGAGATAAAGCTTAAAAACTATGATGGTGATCTCTCAAAACTGGGATCTGCAGAAAGGTTTCTTAAAACAGTGCTTGATATCCCTTTTGCCTTTAAAAGAGTTGAAGCTATGCTATATAGAGCCAACTTTGATGCAGAAGTTAACTACCTTAGAAAGTCTTTTCAAACCATGGAGGAAACTGACCTTTCAGTTGTTAATATCTTTCAGGCTGCAAGTGATGAATTAAAGAACAGCCGCTTATTCCTCAAACTCCTTGAAGCTGTTCTAAGGACAGGAAACAGAATGAATGTTGGCACCAATCGAGGGGATGCTAAAGCTTTCAAACTGGAGACACTCCTAAAACTTGTAGATATAAAGGGAACGGATGGAAAGACGACATTGCTCCACTTTGTGGTCCAAGAGATTATTAGATCTGAAGGTGCAGAAGCTGAATCTGCAAACGAGAATGTGAAAATGGATTCCAAATTTAATGAGGATGAGTTTAAGAAGCAAGGATTGCAGGTTGTGGCAGGGCTCAGTAGAGATCTTAGTAATGTAAAAAAAGCAGCAGGAATGGATTCAGATGTCTTGAGCAGCTATCTTTCGAAGCTTGAAACGGGGCTTGATAAAGTGCGATTGGTTTTGCAATATGAAAAGCCAGATTTGCATGGTAATTTCTTTAAATCCACAAAGCTATTTCTGAAATATGCTGAAGATGAAATTATTAGGATTAAAGCGGATGAGAGAAAAGCCTTGTATCTTGTAAAAGAAGTTACGCAATACTTTCATGGGAATGCAGCGAAGGAAGAAGCCCACCCTCTTAGAATTTTCATGATTGTAAGAGACTTTCTGAATATTTTGGATCTAGTGTGCAAAGAAGTGGAAAAAATGCATGATAGAATTGTTGGTGGTTCTGGCAGATCCTTCCGAATAGCACCAAATGCATCATTACCTGTTCTCAATAGGTACAACCATCCAAAGCAGGATAGAAGCTCAGACGAGGAGAGTTCATCCCCCTAG 2661 0.4761 MKARHLSFFYFCIFLLTPFLSIPVNTEKGVNDSTSANESGTRRILHQPLFPASSEPPPPLPVETPPSPNGGNIPFFHEYPAGPPPDQNQAAPFTSNTTIANPTATQPTKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKHPLETQKLVAGSGNNNNNNSIPNRNEVDSTAPPSSFLYIGTVEPTRAPINDSRDNRDVNKGNRSPYHKLKRSDRYRPSPELQPMPPLSKPPDGNYPPAVSSSSSDSDEESRGTAFHSPQNSSVDGYYTPASRQSSLVNGSPAKRDANSTPTPVVPFSKRTSPKSRVPAPSPEIRHVIIPSIKQPPPSSPPPPKHSRQPKFSAPPPHLQSTTDTVSHVSKTSLNPPPPPPPPPPPPPPPPRKSVSPAVSASSNSASVKRQSWSPVERSVTKGSEEVEQSVSSSERLEANDRDGAKPKLKALHWDKVRATSDRATVWDQIKSSSFQLNEDMMESLFGCKAANSALKEPPRKSVLPSVDHENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGTELLETLVKMAPTKEEEIKLKNYDGDLSKLGSAERFLKTVLDIPFAFKRVEAMLYRANFDAEVNYLRKSFQTMEETDLSVVNIFQAASDELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAEAESANENVKMDSKFNEDEFKKQGLQVVAGLSRDLSNVKKAAGMDSDVLSSYLSKLETGLDKVRLVLQYEKPDLHGNFFKSTKLFLKYAEDEIIRIKADERKALYLVKEVTQYFHGNAAKEEAHPLRIFMIVRDFLNILDLVCKEVEKMHDRIVGGSGRSFRIAPNASLPVLNRYNHPKQDRSSDEESSSP 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00599 886 MobiDBLite consensus disorder prediction 410 433 - -
Spst2g00599 886 SUPERFAMILY Formin homology 2 domain (FH2 domain) 369 845 - -
Spst2g00599 886 MobiDBLite consensus disorder prediction 149 433 - -
Spst2g00599 886 MobiDBLite consensus disorder prediction 149 177 - -
Spst2g00599 886 Gene3D Formin, FH2 domain 423 846 IPR042201 -
Spst2g00599 886 ProSiteProfiles Formin homology-2 (FH2) domain profile. 428 860 IPR015425 -
Spst2g00599 886 MobiDBLite consensus disorder prediction 385 409 - -
Spst2g00599 886 Pfam Formin Homology 2 Domain 433 834 IPR015425 -
Spst2g00599 886 SMART it6_source 428 849 IPR015425 -
Spst2g00599 886 MobiDBLite consensus disorder prediction 343 361 - -
Spst2g00599 886 MobiDBLite consensus disorder prediction 236 299 - -
Spst2g00599 886 PANTHER FORMIN-RELATED 8 880 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Spst2g00599 886 MobiDBLite consensus disorder prediction 362 384 - -
Spst2g00599 886 MobiDBLite consensus disorder prediction 220 234 - -
Spst2g00599 886 PRINTS Proline rich extensin signature 361 386 - -
Spst2g00599 886 PRINTS Proline rich extensin signature 329 346 - -
Spst2g00599 886 PRINTS Proline rich extensin signature 292 313 - -
Spst2g00599 886 PRINTS Proline rich extensin signature 226 242 - -
Spst2g00599 886 PRINTS Proline rich extensin signature 212 224 - -
Spst2g00599 886 MobiDBLite consensus disorder prediction 867 886 - -
Spst2g00599 886 MobiDBLite consensus disorder prediction 190 218 - -
Spst2g00599 886 MobiDBLite consensus disorder prediction 323 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00599 Spst-Chr2 4921526 4926501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00599 385 876 FH2 protein (formin) Gene Family AT5G67470 68.548 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00599 - - gmx:100798670 1316.98