Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00595 ATGAATCAAACTAAAGAGCAGAAGGAGGTGACAAAGTTCATAGCGAAGCAAAGTGTGTTGTTGTTGAAGATGATGGACGGTTATTTGAATGAGAATTTTGAAGTGAAGTCCAAAAACTCTTCCGAAGAGGCTCTTCAGAGATGGAGGAAATTGTGCGGGGTTGTGAAGAACCACAAAAGGCGCTTTCGTTTCACTGCCAATCTCTCCAAGAGAGGCGAAGCTGCTGCTATGCGTCGTACCAACCAGAAGAAGCTGAGGATTGCAGTTTTGGTTTCCAAAGCAGCTGTTCAATTTATCCAAAGCGTGCAACTAACCGATTACAAAGTGCCAGAGGAAGTTAAAGCTGGAGGTTTTCAAATCTGTGGCGATGAATTGGGGTGTATTGTTGAAGGCCATGATGTAAAGAAGTTCAGATATCACGGTGGGGTTAATGGCATTGCAGAGAAGCTTTCTACTTCAACCACTGAGGGGCTTAACGGTGACAGTGAGTTATTGAATAGGAGACAGCAGATATACGGTATCAACAAATTTACTGAAAGTGAATCTACAAGTTTCTGGGTTTTTGTTTGGGAAGCCTTCCAAGACATGACTCTGATGATACTAGGAGTGTGTGCTATTGTGTCACTGCTAGTTGGCATTGCAACTGAAGGATGGCCGAAGGGAGCTCATGATGGTCTTGGAATTGTTGCAAGTATCTTACTTGTTGTCTTTGTGACAGCAACAAGTGATTATCGCCAATCATTGCAATTCAAGGATTTAGACAAGGAGAAGAAGAAAATATCCATTCAGGTCACAAGAAATGGATACAGACAGAAAATGTCAATATATGAATTACTTCCTGGAGACATTGTGCATCTTGCCATTGGTGACCAAGTCCCTGCTGATGGACTATTTGTCTCAGGATTTTCTGTGTTGATCGATGAGTCAAGCTTAACAGGCGAGAGTGAGCCAGTGATGGTGAATTATGAAAATCCATTTCTTCTTTCTGGAACTAAGGTCCAAGATGGATCATGCAAGATGTTGGTCACCAGTGTTGGCATGAGGACTCAATGGGGGAAGTTGATGGCTACTCTCAGTGAAGGTGGAGATGATGAAACCCCACTACAAGTGAAGTTGAATGGTGTTGCAACCATTATTGGGAAGATAGGTCTATTCTTTGCAGTGGTTACTTTTGCAGTTCTAGTGCAAGGACTTGTTAGCCAAAAACTCCAACTAGGAAGCTTATCGAGCTGGAATGGGGATGATGCATTGCAGCTGTTGGAGTTCTTTGCAGTTGCAGTTACTATAGTTGTTGTTGCTGTTCCAGAGGGACTGCCATTAGCTGTGACATTGAGCCTTGCATTTGCTATGAAGAAAATGATGAATGACAAAGCCCTTGTGAGACATTTGGCAGCCTGTGAGACCATGGGATCAGCAACAACTATATGTAGTGACAAGACTGGGACACTAACAACGAACCACATGACTGTTGTGAAAACATGCTTTTGCATGAAAAGCATGGAAGTAAGCAATAATAAGGCCTCTGGTTTGTGCTCTGAACTCCCAGAATCCGCTGTGAAACTCCTGCTACAGTCAATATTCAATAATACAGGAGGAGAAGTTGTGGTTAACCAAAACGGTAAACGTGAGATTTTAGGGACTCCAACCGAGGCTGCAATATTGGAGTACGGTTTGTCTTTAGGTGGAGATTTTCAAGGAGAGAGACAATCATGTAAACTTATTAAAGTTGAGCCATTCAATTCCACTAAGAAGAAAATGAGTGTGGTGGTTGAGCTCCCTGATGGAGGCCTAAGAGCCCACTGCAAAGGTGCTTCTGAAATAATTCTGGCTGCCTGTGACAAAGTTCTCAACTCAAACGGTGAGGTTGTACCCCTTGATAAAGAATCAACTAACCATCTTGAGGCCACAATAAACCAGTTTGCAAGTGAGGCACTTAGGACACTATGCCTTGCTTATGTGGAATTGGAAAACGGGTTCTCTCCTGAAGACCCTATTCCTGTTTCTGGATATACTTGTATAGGAGTTGTTGGTATCAAAGATCCTGTTCGCCCTGGTGTTAAGGAATCTGTGGCAGTGTGTCGTTCAGCTGGAATAACAGTACGAATGGTTACCGGGGACAACATCAACACTGCAAAGGCTATAGCCAAGGAGTGTGGAATTTTAACTGATGATGGCATAGCAATTGAAGGACCAGAGTTTAGAGAGAAGAGTGAGGAAGAGTTACTTGAGCTGATTCCCAAAATTCAGGTTATGGCTAGATCTTCACCTTTAGACAAACATACATTGGTGAAACACTTGCGCACAACGTTTGGGGAAGTGGTTGCTGTAACAGGTGATGGAACTAATGATGCCCCAGCCCTTCATGAAGCTGATATTGGACTTGCAATGGGCATTGCTGGAACTGAGGTTGCAAAAGAAAGTGCAGATGTCATAATTCTGGACGATAACTTCTCCACAATCGTAACAGTGGCCAAATGGGGACGTTCAGTTTACATAAATATTCAGAAATTCGTACAGTTTCAGCTGACCGTTAATGTGGTTGCATTAATAGTGAACTTCACATCAGCTTGCTTGACAGGAACTGCGCCCCTCACAGCTGTTCAACTTTTGTGGGTGAACATGATAATGGACACACTAGGAGCACTTGCGCTTGCTACTGAACCTCCAAATGATGAGTTAATGAAACGTTCACCTGTTGGAAGGAAGGGAAATTTCATCAGCAATGTCATGTGGAGGAACATCTTAGGCCAATCCTTGTATCAGTTTATGGTGATATGGTTTCTTCAGTCAAGAGGAAAATCAATCTTTTTACTTGACGGCCCCAATTCGGATCTAGTCTTAAACACACTTATTTTCAACTCATTTGTCTTCTGCCAGGTTTTCAATGAGATAAATTCGCGGGAAATGGAGAAAATAAACGTTTTCAAAGGCATATTGGATAATTATGTTTTCGTGGGTGTGATCAGTGCTACTGTTTTCTTCCAAATCGTAATCGTAGAGTACTTGGGAACCTTCGCAAACACAACACCTCTCACCCTGCCACAGTGGTTCTTTTGCTTATTCGTTGGATTTTTGGGCATGCCTATTGCTGCTCGATTAAAGAAGATCCCTGTTTGA 3117 0.427 MNQTKEQKEVTKFIAKQSVLLLKMMDGYLNENFEVKSKNSSEEALQRWRKLCGVVKNHKRRFRFTANLSKRGEAAAMRRTNQKKLRIAVLVSKAAVQFIQSVQLTDYKVPEEVKAGGFQICGDELGCIVEGHDVKKFRYHGGVNGIAEKLSTSTTEGLNGDSELLNRRQQIYGINKFTESESTSFWVFVWEAFQDMTLMILGVCAIVSLLVGIATEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNGYRQKMSIYELLPGDIVHLAIGDQVPADGLFVSGFSVLIDESSLTGESEPVMVNYENPFLLSGTKVQDGSCKMLVTSVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLVSQKLQLGSLSSWNGDDALQLLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKTCFCMKSMEVSNNKASGLCSELPESAVKLLLQSIFNNTGGEVVVNQNGKREILGTPTEAAILEYGLSLGGDFQGERQSCKLIKVEPFNSTKKKMSVVVELPDGGLRAHCKGASEIILAACDKVLNSNGEVVPLDKESTNHLEATINQFASEALRTLCLAYVELENGFSPEDPIPVSGYTCIGVVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIAKECGILTDDGIAIEGPEFREKSEEELLELIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFTSACLTGTAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRKGNFISNVMWRNILGQSLYQFMVIWFLQSRGKSIFLLDGPNSDLVLNTLIFNSFVFCQVFNEINSREMEKINVFKGILDNYVFVGVISATVFFQIVIVEYLGTFANTTPLTLPQWFFCLFVGFLGMPIAARLKKIPV 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00595 1038 SMART Cation_ATPase_N_a_2 137 213 IPR004014 -
Spst2g00595 1038 Gene3D - 473 822 IPR023214 -
Spst2g00595 1038 Pfam Cation transporting ATPase, C-terminus 862 1035 IPR006068 -
Spst2g00595 1038 ProSitePatterns E1-E2 ATPases phosphorylation site. 478 484 IPR018303 -
Spst2g00595 1038 SUPERFAMILY Calcium ATPase, transduction domain A 262 356 IPR008250 -
Spst2g00595 1038 SUPERFAMILY HAD-like 474 882 IPR036412 -
Spst2g00595 1038 Pfam Cation transporter/ATPase, N-terminus 139 208 IPR004014 -
Spst2g00595 1038 PRINTS H+-transporting ATPase (proton pump) signature 633 651 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst2g00595 1038 PRINTS H+-transporting ATPase (proton pump) signature 777 793 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst2g00595 1038 PRINTS H+-transporting ATPase (proton pump) signature 809 834 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst2g00595 1038 FunFam Calcium-transporting ATPase 40 100 - -
Spst2g00595 1038 Gene3D - 40 100 - -
Spst2g00595 1038 PANTHER CATION TRANSPORTING ATPASE 82 1037 - -
Spst2g00595 1038 Gene3D - 486 681 IPR023299 GO:0000166
Spst2g00595 1038 SFLD Haloacid Dehalogenase 458 829 - -
Spst2g00595 1038 FunFam Calcium-transporting ATPase 670 822 - -
Spst2g00595 1038 NCBIfam calcium-translocating P-type ATPase, PMCA-type 135 1038 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Spst2g00595 1038 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 1037 IPR023298 -
Spst2g00595 1038 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 482 686 IPR023299 GO:0000166
Spst2g00595 1038 Gene3D - 191 1026 - -
Spst2g00595 1038 PRINTS P-type cation-transporting ATPase superfamily signature 476 490 - -
Spst2g00595 1038 PRINTS P-type cation-transporting ATPase superfamily signature 777 796 - -
Spst2g00595 1038 PRINTS P-type cation-transporting ATPase superfamily signature 307 321 - -
Spst2g00595 1038 PRINTS P-type cation-transporting ATPase superfamily signature 674 685 - -
Spst2g00595 1038 PRINTS P-type cation-transporting ATPase superfamily signature 801 813 - -
Spst2g00595 1038 PRINTS P-type cation-transporting ATPase superfamily signature 696 706 - -
Spst2g00595 1038 SFLD p-type atpase 458 829 IPR044492 -
Spst2g00595 1038 CDD P-type_ATPase_Ca_PMCA-like 165 910 - -
Spst2g00595 1038 NCBIfam HAD-IC family P-type ATPase 228 498 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst2g00595 1038 NCBIfam HAD-IC family P-type ATPase 748 863 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst2g00595 1038 NCBIfam HAD-IC family P-type ATPase 572 722 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst2g00595 1038 Pfam Ca2+-ATPase N terminal autoinhibitory domain 29 72 IPR024750 GO:0005516
Spst2g00595 1038 Pfam E1-E2 ATPase 260 454 - -
Spst2g00595 1038 FunFam Calcium-transporting ATPase 794 1038 - -
Spst2g00595 1038 FunFam Calcium-transporting ATPase 239 359 - -
Spst2g00595 1038 Gene3D - 163 359 - -
Spst2g00595 1038 FunFam Calcium-transporting ATPase 486 681 - -
Spst2g00595 1038 Pfam Cation transport ATPase (P-type) 537 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00595 Spst-Chr2 4889684 4894469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00595 25 1038 Primary Pumps ATPases AT4G37640 81.872 0.0 1718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00595 K01537 - gmx:547567 1862.43