Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00591 ATGAGCTTTGTACAAGCACTGTGTCCGCCGTGTAGTTGCCATAAGTTGCAGAGCGTCGAATGCGGACATTCGGCGACGGAGAAGTTAGGGTTCACCAAATTCTGCGAAATCGGTGCAGTTGGATTAAGTGGTAGTCGTAAAAGCTTGTTGAAGCCGATTATGGCAAAGGAAAATAGTGGCGCGTCTTTGATCGATGACGGACATGAAGTGAAGAAGCCTGTCCTTACACATTTGGCTAATCACTCCGCAGCATTATCTGGTAAAACTCTCAGCGAGTTGTCAAATATTGGGAATTCGATGAACATTTTGTGGCATGAATGTCCTATACAGAAACTTGATAGAGAGCATCTTCTTCAGCAAAAGGGCTGCGTCATTTGGTTAACGGGTCTCAGTGGTTCAGGTTTGTGCAATTGTTGGTCAAAGAAAGTGGGCAAGGAGACATTGATTTCAGGAAAAAGCACTGTGGCATGTGCTTTGAGTAGAAGCTTGCATTCCAGAGGAAAGTTGACTTATATCCTTGATGGCGACAATATTCGACATGGTCTAAACCGTGATCTTAGTTTTCGAGCAGAAGATCGTTCAGAGAACATACGAAGGATTGGTGAGGTTGCAAAGCTCTTGGCAGATGCAGGTCTTATTTGTATCACTAGTTTAATATCTCCCTACCGAAAGGATAGGGATGCTTGTCGAGCTCTATTGCCAGAGGGAAATTTTATCGAGGTTTTCCTAGACGTGCCACTAGAGGTGTGTGAAGCAAGGGACCCGAAGGGACTCTATAAGCTTGCTCGAGCTGGAAAGATCAAAGGTTTCACGGGGATAGACGATCCATATGAACCACCATATAGCTGTGAGGTGGGTATTTATTGCATAACTTGTGTTGCACTGGTGAACGACTTAACGGCGGTGTTAAGTGAATCGCATGGTCGTGCCAAGGCGGTTGTGAGAGGGGAGAAAAATCGAGCGGCGGAGTCCGTTTCTGAATATCCCCAGAAAGTGAAGCAGAATCATATAAATAGAACCCTAGCAGCAACTATGGGTAAGAAGCAACACAGCAAAGACAGGATGTTCATCACCAAAACGGAGTGGGCAACGGAGTGGGGAGGCGCTAAATCTAAAGACAATCGCATTCCCTTCAAACGTCTTCCCTTCTATTGCTGCTCGCTTACCTTTACGCCGTTTGAAGAACCTGTCTGCACTGCTGATGGCAGTGTTTTCGATATTATGTTCCAAGACTGCAACTATGTTGTGCTAGGGGTGACCATAATTAAGGTGCCTTTCCAACACTTTGAATTACCAATGTCAAATGGAAATGCTATGATGCTATTCTTGTGTAGCCCTGTCGCTACTCAAATTCAAACTGTTGTTTTCTCTAATACATATGGTGTGCTTCCATTTCTTGGGGAGAAGTTGGGATCTGCTGTGAAAGAGTTGAACATTAAGATAAAAAACTGGAAGGAGCTCCTCACTGATGAGCCATTCACAAGGGATGACCTTATAACCATTCAGAATCCTAATGCACTTGACAGCAAGGTTCTTCTGGATTTTGATCATATTAAAAATAGTTTGAAAGTTGATGATGAAGAACTACAGAAAATGAGTTCAGATCCAACCTATAACATAAACATGTCGGGTGATATAAAGCAAATGCTTCAGGAGCTTGGAACCGAGAAAGGAAAGGAAACTGCAATGCATGGGGGAGGTGGTGGCAAGGCACAAAAAGAAAGGGCTGCTGCACTTGCTGCCATCATAGCTGCAAGGTCCCGTGTTGAGGAAGATTCCAATTCAAATCCAAATAAAGAGGCCAAAGCTCCTCAGTCATTTAGTATTGTAGATGCTGCATCTGCTGCAGTACATGGAAGAAGTGCAGCTGCTGCTAAAGCCTCATCAGGTGATAAAACTGCAGCCAGAATAGCTATGCATATGTCTGGTGATAGGGCACCAGTGAATGCAAAGATGGTAAAAAGTCGTTTCACAACTGGTGCTGCTTCCCGGTCTTTTACTTCAACATCATTTGATCCAGTTACAAAAAATGAATTTGAATATGTGAAAGTTGAGAAGAATCCAAAGAAAAAGGGTTACGTACAACTGCATACAACACATGGTGATTTGAACATTGAGCTACATTGTGATATAACACCTAGGACGTGTGAAAACTTCATCACTCTTTGTGAGCGTGGATTTTATAACGGAGTTGCTTTTCATAGAAACATCAGGAATTTTATGATACAGGGTGGTGATCCTACTGGTACTGGTCGAGGCGGGGAATCTATATGGGGAAAGCCCTTTAAAGATGAACTTAACTCCAAACTAATTCACTCTGGAAGGGGTGTTGTAAGCATGGCAAACAGTGGCCCACACACCAATGGTTCCCAGTTCTTCATCTTGTACAAGTCTGCAAATCATCTAAACTTCAAACATACAGTTTTTGGAGTAGTTGTCGGTGGCTTGACTACACTAGCAGCCATGGAAAAGGTTCCAGTTGATGATAATGACCGACCTCTGGAGGAAATCAAGATAACAAGTGTCACGATTTTTGTCAATCCTTACACAGAACCAGATGAAGGAGAAGAGCACGATAATGCCAAAGAGAAGAATGTAGATGATGAAGATAATGGTAAGGTAGGTTCATGGTATAGCAATCCTGGCGCGGGAACGTCTGAATCTGGAGGTACGGGGGCTGCTGGTGGTGTCGGCAAGTACTTGAAAGCTAGGAATGCTCAAGCTACATCTGCTGCTACCCTTGACACCGGCACAGCCGTTGTAGTAAAGAAAAGAAAAGTGGGAGTTGCCAGCAGTGAATTTAAAGATTTTTCTGCGTGGTAA 2823 0.4368 MSFVQALCPPCSCHKLQSVECGHSATEKLGFTKFCEIGAVGLSGSRKSLLKPIMAKENSGASLIDDGHEVKKPVLTHLANHSAALSGKTLSELSNIGNSMNILWHECPIQKLDREHLLQQKGCVIWLTGLSGSGLCNCWSKKVGKETLISGKSTVACALSRSLHSRGKLTYILDGDNIRHGLNRDLSFRAEDRSENIRRIGEVAKLLADAGLICITSLISPYRKDRDACRALLPEGNFIEVFLDVPLEVCEARDPKGLYKLARAGKIKGFTGIDDPYEPPYSCEVGIYCITCVALVNDLTAVLSESHGRAKAVVRGEKNRAAESVSEYPQKVKQNHINRTLAATMGKKQHSKDRMFITKTEWATEWGGAKSKDNRIPFKRLPFYCCSLTFTPFEEPVCTADGSVFDIMFQDCNYVVLGVTIIKVPFQHFELPMSNGNAMMLFLCSPVATQIQTVVFSNTYGVLPFLGEKLGSAVKELNIKIKNWKELLTDEPFTRDDLITIQNPNALDSKVLLDFDHIKNSLKVDDEELQKMSSDPTYNINMSGDIKQMLQELGTEKGKETAMHGGGGGKAQKERAAALAAIIAARSRVEEDSNSNPNKEAKAPQSFSIVDAASAAVHGRSAAAAKASSGDKTAARIAMHMSGDRAPVNAKMVKSRFTTGAASRSFTSTSFDPVTKNEFEYVKVEKNPKKKGYVQLHTTHGDLNIELHCDITPRTCENFITLCERGFYNGVAFHRNIRNFMIQGGDPTGTGRGGESIWGKPFKDELNSKLIHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGVVVGGLTTLAAMEKVPVDDNDRPLEEIKITSVTIFVNPYTEPDEGEEHDNAKEKNVDDEDNGKVGSWYSNPGAGTSESGGTGAAGGVGKYLKARNAQATSAATLDTGTAVVVKKRKVGVASSEFKDFSAW 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00591 940 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 693 843 IPR002130 GO:0000413|GO:0003755
Spst2g00591 940 Gene3D - 92 303 IPR027417 -
Spst2g00591 940 MobiDBLite consensus disorder prediction 849 894 - -
Spst2g00591 940 SUPERFAMILY Cyclophilin-like 693 852 IPR029000 -
Spst2g00591 940 CDD APSK 124 285 IPR002891 GO:0000103|GO:0004020|GO:0005524
Spst2g00591 940 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 791 803 IPR002130 GO:0000413|GO:0003755
Spst2g00591 940 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 733 745 IPR002130 GO:0000413|GO:0003755
Spst2g00591 940 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 776 791 IPR002130 GO:0000413|GO:0003755
Spst2g00591 940 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 804 819 IPR002130 GO:0000413|GO:0003755
Spst2g00591 940 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 707 722 IPR002130 GO:0000413|GO:0003755
Spst2g00591 940 MobiDBLite consensus disorder prediction 851 871 - -
Spst2g00591 940 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 697 844 IPR002130 GO:0000413|GO:0003755
Spst2g00591 940 NCBIfam adenylyl-sulfate kinase 104 287 IPR002891 GO:0000103|GO:0004020|GO:0005524
Spst2g00591 940 PANTHER BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE 100 287 - -
Spst2g00591 940 FunFam Peptidyl-prolyl cis-trans isomerase cyp65 674 858 - -
Spst2g00591 940 Gene3D - 674 856 IPR029000 -
Spst2g00591 940 Pfam Adenylylsulphate kinase 121 287 - -
Spst2g00591 940 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 728 745 IPR020892 GO:0003755|GO:0006457
Spst2g00591 940 CDD cyclophilin_RING 693 851 - -
Spst2g00591 940 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 282 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00591 Spst-Chr2 4849110 4866172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00591 345 940 U-box Gene Family AT5G67530 66.886 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00591 K10598 - gmx:100819923 938.717