Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00590 ATGGATACGACGTTGTTTGGGGTAGTGAGATTCCAACATCAACTCCAACCTCAAGCTCAAGGACAAGCTCAAGGTGATCAAGATCAATCCCTCAACAACTCCACCACCAGTAGCAGCTCTCGATCCTCCAGACAGCAAAACTATCCCTACCCACCACAAGAAGACGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACCTATCCTCGTCTTCTTCCAAGCACTACTATCCCTATCAACCCCACCCTCCCTCCACTACACCCACCACCACCCCCACCACCACCGACCTCTCCTTCTCTCCCACACGCGACGCTGCCTTCCCTTTCCACCTCTCCGGCAAGTGGTCCCACGACATCCTCCTCGAAACCGCACGTGCCCTCTCCGACAAGAACACCACGCGCCTCCAACAACTCATGTGGATGCTCAACGAACTCGCCTCCCCCTACGGCGACATCGACCAGAAACTCGCCTCATACTTCCTCCAAGCCTTCTTCAGCCGCATCACCCAAGCCGGGGACCGAACCTACCGAACCTTAGCCTCGGCCTCCGAGAAAACATGCTCCTTCGAATCCACGCGCAAGACCGTGCTGAAGTTCCAAGAGGTTAGTCCCTGGACAACGTTCGGCCACGTGGCGTCCAATGGCGCCATCTTGGAAGCCTTGGAAGGAGAGCCCAAACTACACATAGTTGACATCAGCAACACCTATTGCACCCAATGGCCTACGCTCTTCGAAGCCTTGGCCACTCGAAACGACGACACTCCGCACCTCCGTCTAACCTCCCTCGTCACCGCCGCCTCTGCGCACAAGGTCATGAAGGAAATCGGCGCCAGAATGGAGAAATTCGCCAGACTCATGGGCGTGCCCTTTCAATTCAAAGTCGTTCATCACTTAGGTCACCTTTCGGACTTCGATTTCAACGTGTTGGATATTAAACAAGACGAGGCCTTGGCTATTAACTGCGTCAACACTTTGCATTCGATATCCGCCGTCGGGAGCCACCGCGACGCCGTGATATCCGCGTTAAGGAGGCTGCAGCCGAGGATCGTGACGGTGGTGGAGGAGGAGGCGGACTTGGACGTGGGATTGCAGGGTCTGGAGGGGTTGGAATTCGTGAAGGGGTTTGAAGAGTGTTTGAGGTGGTTTAGGGTTTACTTCGAAGCGTTGGAGGAGAGCTTTCCGCGGACGAGCAACGAGCGGTTGATGCTGGAGCGGGCTGCGGGAAGGGCGGTGGTAGACCTGGTCGCTTGTTCGACGGAGGAGTCGGTGGAACGGCGGGAGAGGGCGGGGCGGTGGACGAGGAGGATGCATGGAGGGGGCTTCAATGCGGTGGCGTTTAGCGAAGAGGTTTGTGATGATGTGCGGGCGTTGTTGAGGAGGTATAGGGAGGGGTGGGCAATGGCACAGTGCTCCGACGCCGGAATATTCCTTTCGTGGAAGGAGCAGCCGGTGGTGTGGGCCAGTGCATGGAGGGCCTTGACGTAG 1485 0.5657 MDTTLFGVVRFQHQLQPQAQGQAQGDQDQSLNNSTTSSSSRSSRQQNYPYPPQEDEECFNFFMDEEDLSSSSSKHYYPYQPHPPSTTPTTTPTTTDLSFSPTRDAAFPFHLSGKWSHDILLETARALSDKNTTRLQQLMWMLNELASPYGDIDQKLASYFLQAFFSRITQAGDRTYRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALEGEPKLHIVDISNTYCTQWPTLFEALATRNDDTPHLRLTSLVTAASAHKVMKEIGARMEKFARLMGVPFQFKVVHHLGHLSDFDFNVLDIKQDEALAINCVNTLHSISAVGSHRDAVISALRRLQPRIVTVVEEEADLDVGLQGLEGLEFVKGFEECLRWFRVYFEALEESFPRTSNERLMLERAAGRAVVDLVACSTEESVERRERAGRWTRRMHGGGFNAVAFSEEVCDDVRALLRRYREGWAMAQCSDAGIFLSWKEQPVVWASAWRALT 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00590 494 ProSiteProfiles GRAS family profile. 107 491 IPR005202 -
Spst2g00590 494 MobiDBLite consensus disorder prediction 72 96 - -
Spst2g00590 494 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 91 481 IPR005202 -
Spst2g00590 494 Pfam GRAS domain family 118 491 IPR005202 -
Spst2g00590 494 MobiDBLite consensus disorder prediction 16 50 - -
Spst2g00590 494 MobiDBLite consensus disorder prediction 16 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00590 Spst-Chr2 4842403 4843887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00590 45 491 GRAS Transcription Factor Family AT4G37650 61.616 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst2g00590 GRAS 1.7e-104 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00590 - - gmx:100797072 754.977