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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Spst2g00586
ATGGGTGCTCCTAAGCAAAAATGGACTGCAGAGGAAGAAGCGGCGTTGAAAGCTGGAGTAGTCAAACATGGGGCTGGAAAATGGCGCACCATACTTACAGACCCAGACTTCAGTTCCATTCTGCGCATGCGGTCAAATGTAGATCTCAAGGACAAATGGAGGAACATAAATGTGACGGCAATATGGGGATCAAGGCAGAAGGCAAAGCTTGCACTTAAAAAGAACCTACTACCATCCCCTAAAATTGACAATAACCACATGGCCTTGAGTACTGTAGTTCAACGTGACAGAGAAGTTGCAGATTCCAAGCCTCTGGCAGTTTCTGGTGGAATATCTCCTAATTCAAAGGAAAAAGTATCAAGGCTACAGAACTTCCAGTTGGATAATCTTATATTAGAGTCTATTATCAAGTTGAAGGAGCCAAAGGGTTCGGACAGAGCAGCAATTGCTTCATATATAGAGGATCAATACTGTACTACGCCAACCCTCAGAAAGTTACTGTCAACAAAACTGAAGCACATGGTGGCATGTGGAAAATTAATGAAGGTAAAACATAAGTACAGGATTGCCACAAATTTAACAATGTCTGAGAAAAGAAGATGTTCTTCCTTGGTACTCCTGGAAGCGAGACCCAAAGATTCTCCAAAAGCAGAGAAGGCTAGTATCAACATCCTTTCAAAATCCGAAATTGATGCAGAGCTATCAAAAATGAAGGGTGTAACACCACAAGAGGCGGCAGCAGCAGCTGCAAAAGCAGTTGCTGAGGCAGAAGCTGCTATTGCCGAGGCTGAGGCAGCAGCTAGGGAGGCAGACGCTGCAGAAGCTGAGGCAGAGGCTGCACGGGTGTTTGCAAAGGCAGCAATAAAGGCACTAAAATGCAAGACCCTTCAAATTTGGTAA
900
0.4456
MGAPKQKWTAEEEAALKAGVVKHGAGKWRTILTDPDFSSILRMRSNVDLKDKWRNINVTAIWGSRQKAKLALKKNLLPSPKIDNNHMALSTVVQRDREVADSKPLAVSGGISPNSKEKVSRLQNFQLDNLILESIIKLKEPKGSDRAAIASYIEDQYCTTPTLRKLLSTKLKHMVACGKLMKVKHKYRIATNLTMSEKRRCSSLVLLEARPKDSPKAEKASINILSKSEIDAELSKMKGVTPQEAAAAAAKAVAEAEAAIAEAEAAAREADAAEAEAEAARVFAKAAIKALKCKTLQIW
299
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Spst2g00586
299
SUPERFAMILY
"Winged helix" DNA-binding domain
124
200
IPR036390
-
Spst2g00586
299
SUPERFAMILY
Homeodomain-like
2
67
IPR009057
-
Spst2g00586
299
ProSiteProfiles
Myb-like domain profile.
5
57
IPR001005
-
Spst2g00586
299
SMART
sant
4
59
IPR001005
-
Spst2g00586
299
SMART
h15plus2
121
186
IPR005818
GO:0000786|GO:0003677|GO:0006334
Spst2g00586
299
CDD
SANT_TRF
6
57
-
-
Spst2g00586
299
ProSiteProfiles
Linker histone H1/H5 globular (H15) domain profile.
115
191
IPR005818
GO:0000786|GO:0003677|GO:0006334
Spst2g00586
299
ProSiteProfiles
Myb-type HTH DNA-binding domain profile.
1
61
IPR017930
-
Spst2g00586
299
Coils
Coil
246
280
-
-
Spst2g00586
299
Gene3D
-
2
59
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Spst2g00586
Spst-Chr2
4816784
4819282
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Spst2g00586
1
240
Single Myb Histone (SMH) Gene Family
AT1G49950
48.780
7.68e-75
229
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MYB-related
Spst2g00586
Linker_histone
4.5e-10
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Spst2g00586
K09422
-
gmx:100796539
469.159
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