Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00570 ATGCTTCCTGCTCTTCCCGCTTCCGATCCTCTGCAGGGAAACACATTCCCCGCGTTGGACTATGCTTTCACGCCCTGGGATGGGCCTGAATTTTCGGCCCTCAAGCCCACTAGCCCCAACCCAGTCACCTCCAGTTCCGGTTCGGACGACCCCAATCGATCCCCTGCAGACGAAAATCTGGTGTTGGACCAGTCGAACCGGGCTGTGTCCGTCATGGAGGAACGAAAACGAAGGAGAATGATATCGAACAGGGAATCTGCCCGAAGGTCACGCTTGCGTAAACAGAGACACCTAGACAACTTACGGAACCAGATGAACCTGTTTAGGGTTGAAAACCGAGAACTGAACAACGGGTTGCAGTTCCTCCTTCACCACTGTAACCGTCTACGAACTGAAAACGAGTGGCTCCGGTCCGAACGAACCCTGCTCCGCCAAAAACTGGCCAACATAAATCAAATTATGCTTTTCCAACAATTGCAACCATTTTCCACTGCATGGCCGTGCAATATCGTCATGACAGAATAA 525 0.5181 MLPALPASDPLQGNTFPALDYAFTPWDGPEFSALKPTSPNPVTSSSGSDDPNRSPADENLVLDQSNRAVSVMEERKRRRMISNRESARRSRLRKQRHLDNLRNQMNLFRVENRELNNGLQFLLHHCNRLRTENEWLRSERTLLRQKLANINQIMLFQQLQPFSTAWPCNIVMTE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00570 174 CDD bZIP_plant_GBF1 76 127 IPR045314 GO:0003700|GO:0006355
Spst2g00570 174 Gene3D - 73 127 - -
Spst2g00570 174 MobiDBLite consensus disorder prediction 30 64 - -
Spst2g00570 174 Coils Coil 84 118 - -
Spst2g00570 174 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 136 IPR004827 GO:0003700|GO:0006355
Spst2g00570 174 FunFam BZIP transcription factor 73 124 - -
Spst2g00570 174 PANTHER BZIP TRANSCRIPTION FACTOR 44 39 157 - -
Spst2g00570 174 MobiDBLite consensus disorder prediction 36 64 - -
Spst2g00570 174 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Spst2g00570 174 SMART brlzneu 71 135 IPR004827 GO:0003700|GO:0006355
Spst2g00570 174 Pfam bZIP transcription factor 75 134 IPR004827 GO:0003700|GO:0006355
Spst2g00570 174 SUPERFAMILY Leucine zipper domain 75 127 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00570 Spst-Chr2 4674060 4674584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00570 3 158 bZIP Transcription Factor Family AT3G49760 36.364 3.39e-29 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst2g00570 bZIP_1 3.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00570 - - gmx:102661188 272.707