Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00545 ATGCGTGTCCTCTTCCTATTTCTGTTTTTCCACTTTCTCCATTTTCCTCAAACCCGTTCCTCGCAAATCTCAGAGTACCGCGCCCTTCTCTCTCTCCGTGCAGCCATTACCGATGCCACCCCACCCGTTCTCTCCTCATGGAACGCCTCCACCTCTTACTGTTCATGGCACGGCGTCACCTGTGACGCCCACCGCCATGTCATCGCTCTCAACCTTACCGGACTTGACCTCTCCGGCACTCTCCCCGCCGACGTAGCCCATCTCCCATTCCTCTCCAATGTCTCCCTCGCTGCCAATAAGTTCTCCGGCCCCATCCCTATGGCCCTCTCCTCCCTCTCTGGTCTCCGCTTTCTCAACCTTTCCAACAATGTCTTCAACCAAACCTTCCCTCCGGAGCTCTCGCGCCTCCAGAGCCTCGAGGTCCTCGACCTCTACAACAACAACATGACCGGCGCGCTCCCTCTCGCCGTCACGCAGTTGCTCAACCTCCGCCACTTGCATCTCGGTGGGAACTTCTTCTCCGGCCAGATCCCGCCGGAGTACGGACGGTGGCCGCGCCTCGAGTACCTCGCCGTCTCCGGCAACGAGCTCGACGGGACAATACCGCCGGAGATCGGGAACCTGACCAGCCTCCGGGAGCTTTACATCGGCTACTATAACACCTACGCCGGCGGCATTCCGCCGGAGATCGGAAACTTGTCTGAGCTAGTGAGGCTGGACGCCGCGTACTGTGGTCTGTCCGGCGAGATTCCCGCTGCGATGGGTAAGCTGCAGAAGCTGGACACGCTGTTCCTTCAGGTGAATGCACTGTCAGGGTCTCTGACGCCGGAGCTGGGGAACCTTAAGAGTCTGAAATCGATGGATTTGTCTAACAATATGCTCTCCGGTGAGATTCCGGCAAGTTTCAACGAGCTGAAGAACATTACGCTGCTGAATCTGTTCAGGAACAAGCTTCACGGAGCAATACCGGAGTTTATAGGGGAGCTTCCGGCGTTGGAAGTGGTGCAACTGTGGGAAAACAACTTCACAGGTAGCATTCCTGAGGGTTTAGGCAAGAACGGGAGACTGAACGTTGTTGATCTTTCTTCTAACAAATTAACTGGGACTTTGCCTCCTTACCTCTGTTCTGGGAACAATCTTCAGACTTTGATAACTCTTGGGAATTTCTTGTTCGGTCCAATTCCTGAAGCGCTTGGGAGTTGTGAATCCCTTACCCGGATTCGAATGGGAGAGAACTTTCTAAATGGGTCCATTCCGAAAGGGCTTTTTGGACTTCCTAAACTCACCCAGGTTGAGCTTCAGGATAATTATCTCAGTGGAGAGTTTCCTGAGGCAGGTTCTGTAGCTGTTAATCTTGGTCAGATTACTCTCTCTAACAACCAGCTTTCTGGAGCTTTGCCTCCTTCCATTGGTAACTTCTCCAGCGTGCAGAAGCTCCTTCTTGACGGTAACATGTTCTCGGGTCGGATCCCTCCTCAGATTGGGAGGTTGCAACAACTCTCAAAGATTGATTTTAGTGGCAACAAGTTCTCGGGTCCTATTGCGCCTGAGATCAGTCAATGTAAGTTGTTAACGTTCCTTGACCTTAGCCGCAATGAGCTCTCTGGAGAGATCCCAAATGAGATTACTGGAATGAGGATATTGAATTACCTTAATCTGTCAAGTAATCATTTGGTGGGAAGCATTCCCTCTTCCATATCCTCGATGCAAAGCTTAACTTCAGTTGATTTTTCGTACAACAATCTGTCTGGTTTGGTGCCTGGTACTGGTCAATTCAGCTACTTCAACTACACGTCTTTCTTGGGAAACCCTGACCTTTGTGGCCCCTATTTAGGTGCTTGCAAGGATGGGGTTGCCAATGGAGCACACCAACCTCATGCTAAAGGACTCTCGTCTTCTTTGAAGCTTCTACTTGTTGTGGGGTTGCTTTTATGTTCCATTGCTTTTGCTGTAGCAGCAATATTTAAGGCTCGGTCACTGAAGAAGGCCAGTGAGGCTCGTGCATGGAAGTTGACTGCGTTCCAACGTTTGGACTTCACTGTTGATGATGTTTTGCATTGCTTGAAGGAGGATAATATCATAGGGAAAGGAGGTGCAGGCATTGTCTACAAAGGGGCTATGCCTAATGGGGATCATGTTGCTGTGAAAAGGCTTCCGGCTATGAGTAGAGGCTCTTCCCACGATCATGGGTTCAATGCGGAGATTCAGACACTGGGGCGAATCCGACACAGGCACATTGTTAGATTGTTGGGTTTTTGTTCAAATCACGAGACTAACCTTTTGGTCTACGAGTACATGCCCAATGGAAGCTTAGGTGAGGTTCTTCATGGAAAGAAAGGGGGTCATTTGCATTGGGACACCAGATATAAGATTGCCGTGGAGGCTGCCAAGGGGCTTTGCTATCTGCACCATGATTGTTCTCCGCTCATTGTTCATCGTGATGTGAAGTCAAACAACATCCTTCTTGATTCTAATCATGAAGCCCATGTTGCTGATTTTGGGCTTGCCAAGTTCCTGCAAGATTCTGGGACATCTGAATGCATGTCTGCTATTGCTGGTTCATATGGATACATAGCTCCAGAGTATGCCTACACATTGAAAGTCGATGAGAAAAGCGATGTGTACAGTTTTGGTGTGGTTCTTTTAGAACTTATAACAGGCAGGAAACCAGTTGGGGAATTCGGTGATGGTGTGGACATTGTGCAATGGGTGAGGAAAATGACGGACTCTAATAAGGAAGGAGTTCTTAAAGTTCTTGATCCTAGGCTTCCGTCAGTTCCCCTCCACGAAGTGATGCATGTTTTCTATGTAGCCATGCTATGCGTTGAAGAACAGGCTGTAGAGAGACCAACTATGCGTGAAGTTGTCCAAATACTGACAGAGCTTCCAAAGCCACCTGGTTCTAAACAAGAGGACTTGACAGAATCCTCTTTGTCATCATCAAATGCTTTAGAATCTCCATCCACGGCCTCTAAAGATCATCAAAATCCTCCTCAATCCCCACCACCCGATCTTCTAAGCATTTGA 3027 0.4939 MRVLFLFLFFHFLHFPQTRSSQISEYRALLSLRAAITDATPPVLSSWNASTSYCSWHGVTCDAHRHVIALNLTGLDLSGTLPADVAHLPFLSNVSLAANKFSGPIPMALSSLSGLRFLNLSNNVFNQTFPPELSRLQSLEVLDLYNNNMTGALPLAVTQLLNLRHLHLGGNFFSGQIPPEYGRWPRLEYLAVSGNELDGTIPPEIGNLTSLRELYIGYYNTYAGGIPPEIGNLSELVRLDAAYCGLSGEIPAAMGKLQKLDTLFLQVNALSGSLTPELGNLKSLKSMDLSNNMLSGEIPASFNELKNITLLNLFRNKLHGAIPEFIGELPALEVVQLWENNFTGSIPEGLGKNGRLNVVDLSSNKLTGTLPPYLCSGNNLQTLITLGNFLFGPIPEALGSCESLTRIRMGENFLNGSIPKGLFGLPKLTQVELQDNYLSGEFPEAGSVAVNLGQITLSNNQLSGALPPSIGNFSSVQKLLLDGNMFSGRIPPQIGRLQQLSKIDFSGNKFSGPIAPEISQCKLLTFLDLSRNELSGEIPNEITGMRILNYLNLSSNHLVGSIPSSISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLGACKDGVANGAHQPHAKGLSSSLKLLLVVGLLLCSIAFAVAAIFKARSLKKASEARAWKLTAFQRLDFTVDDVLHCLKEDNIIGKGGAGIVYKGAMPNGDHVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNHEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPGSKQEDLTESSLSSSNALESPSTASKDHQNPPQSPPPDLLSI 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00545 1008 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 766 976 - -
Spst2g00545 1008 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 657 765 - -
Spst2g00545 1008 MobiDBLite consensus disorder prediction 962 1008 - -
Spst2g00545 1008 SUPERFAMILY RNI-like 70 391 - -
Spst2g00545 1008 Gene3D Ribonuclease Inhibitor 220 373 IPR032675 -
Spst2g00545 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Spst2g00545 1008 PANTHER RECEPTOR-LIKE PROTEIN 55 379 961 - -
Spst2g00545 1008 MobiDBLite consensus disorder prediction 970 995 - -
Spst2g00545 1008 Gene3D Ribonuclease Inhibitor 374 615 IPR032675 -
Spst2g00545 1008 Gene3D Ribonuclease Inhibitor 22 219 IPR032675 -
Spst2g00545 1008 Pfam Leucine Rich Repeat 162 178 IPR001611 GO:0005515
Spst2g00545 1008 Pfam Leucine Rich Repeat 283 304 IPR001611 GO:0005515
Spst2g00545 1008 SMART LRR_typ_2 329 353 IPR003591 -
Spst2g00545 1008 SMART LRR_typ_2 569 592 IPR003591 -
Spst2g00545 1008 SMART LRR_typ_2 354 377 IPR003591 -
Spst2g00545 1008 SMART LRR_typ_2 160 184 IPR003591 -
Spst2g00545 1008 SMART LRR_typ_2 112 136 IPR003591 -
Spst2g00545 1008 SMART LRR_typ_2 281 305 IPR003591 -
Spst2g00545 1008 Gene3D Phosphorylase Kinase; domain 1 654 765 - -
Spst2g00545 1008 SUPERFAMILY L domain-like 354 611 - -
Spst2g00545 1008 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 82 325 - -
Spst2g00545 1008 Gene3D Transferase(Phosphotransferase) domain 1 766 982 - -
Spst2g00545 1008 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 333 618 - -
Spst2g00545 1008 Pfam Protein tyrosine and serine/threonine kinase 690 959 IPR001245 GO:0004672|GO:0006468
Spst2g00545 1008 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Spst2g00545 1008 SUPERFAMILY Protein kinase-like (PK-like) 684 959 IPR011009 -
Spst2g00545 1008 ProSiteProfiles Protein kinase domain profile. 688 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00545 1008 SMART serkin_6 688 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00545 Spst-Chr2 4468510 4472139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00545 18 987 Receptor kinase-like Gene Family AT5G65700 81.448 0.0 1595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst2g00545 PK_Tyr_Ser-Thr 5.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00545 - - gmx:548032 1869.36