Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00538 ATGGTGTTACAACATTCTTTGTGGCTCATCCTAGTTGCAGCTTTGTTGGGTGGATATGCATTTGTGTTTGGATTTCTTAGGAGAGTGAATGAATGGTATTATGTTTCAAGGCTGGGAAGGAACATGCAACACCCTCTCCCACCGGGTCATCTGGGTTGGCCTTTCTTCGGGAACATGCTCACCTTCTTCAAAGCTTTCAAGTCTGATCCTGATTCTTTTATCTATGATCTTGTTTTCAGATATGGCAGGACTGGTATGTACAGGACATTCTTGTTTGGGAACCCTAGCATCATAGTTTGCACCCCAGAGACATGTCGTAAAGTTCTCACAGATGATGAACAACTCAAGCTTGGATACCCTGCTTCCACCATGTCCCTCTTTCGAAAGAGATCATTCCATGGCATCTCAAATGTGGAACACAAGCGTCTTCGTCGCCTAACCACCTCTCCCATAACTGGCCACGAGGCATTGTCCATGTACATACCTCTCATAGAAGATGTTTCTGTCGAATTGTTGGAAGAGTTGTCAAGCATGAAAACCCCTTCTGAGTTCCTCACAGAGCTGAGGAAGTTCGCTTTTAAGATCATCACCACCATCTTCATGAGCTCTGACGTTGACCATGTGGACCTTGGCTTGGTCGAAAACTTGTACATAGATTTGAATCGTGGAATGAAGTCCCTTCCCATCAATCTCCCAGGCTTTGCATTCTACAAAGCACTCAAGGCACGAAAGAAGTTGACAAAGTTGCTGCAAGGCCTGGTGGACCGAAAGAGAAGGAACAATAATGCAAAAACAAAGACGAAAAAGGACATGATGGATTTATTGATGGAAGTCAAAGATGAAGAGGGTAGGCAGCTGGAGGATGAAGACATCATAGACTTACTTCTGGTGTTCTTGTTAGCTGGTCACGAAAGTTCTGCTCATGGAATATTGTGGACCATCATCTACCTCACACAACACTCACATTTATTCCAAAGGGCTAAGAAAGAACAAGAAGAGATCATCCAAGCAAGACCTTCCACACAGAAAGGGCTGAACCTTAAGGAAATTAAGCAAATGGAATATCTTTCAAAGGTTATCGATGAGATGCTGCGAAAAACAAGTATCTCGTTTGTGAACTTTAGACAGGCAAAGATCGATCTCAACATCAATGGTTATACTATACCAAAAGGATGGAAAGTTCTAGTTTGGAACCGAGGGGTGCACATGGACCCTGAAACTTACTACAACCCAAAGGAATTCGATCCTTCCAGATGGGAAAATCACACAGCAAGAGCAGGTTCTTTTCTTCCGTTTGGATTAGGAAGCAGATTTTGTCCTGGGAGCGACCTGGCCAAACTTGAGATCACCATTTTCCTCCATCATTTTCTTCTTAACTACAGGATGGAGAGAACTAATCCAGATTCTCCAATCACTTATCTACCACTGCCAAGACCCTCAGATAACTGCCCTGCAAGAATTATAAAAGCCACTTAA 1476 0.4336 MVLQHSLWLILVAALLGGYAFVFGFLRRVNEWYYVSRLGRNMQHPLPPGHLGWPFFGNMLTFFKAFKSDPDSFIYDLVFRYGRTGMYRTFLFGNPSIIVCTPETCRKVLTDDEQLKLGYPASTMSLFRKRSFHGISNVEHKRLRRLTTSPITGHEALSMYIPLIEDVSVELLEELSSMKTPSEFLTELRKFAFKIITTIFMSSDVDHVDLGLVENLYIDLNRGMKSLPINLPGFAFYKALKARKKLTKLLQGLVDRKRRNNNAKTKTKKDMMDLLMEVKDEEGRQLEDEDIIDLLLVFLLAGHESSAHGILWTIIYLTQHSHLFQRAKKEQEEIIQARPSTQKGLNLKEIKQMEYLSKVIDEMLRKTSISFVNFRQAKIDLNINGYTIPKGWKVLVWNRGVHMDPETYYNPKEFDPSRWENHTARAGSFLPFGLGSRFCPGSDLAKLEITIFLHHFLLNYRMERTNPDSPITYLPLPRPSDNCPARIIKAT 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00538 491 Pfam Cytochrome P450 47 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00538 491 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00538 491 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00538 491 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00538 491 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00538 491 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00538 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Spst2g00538 491 Gene3D Cytochrome P450 37 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00538 491 PANTHER CYTOCHROME P450 26 44 475 - -
Spst2g00538 491 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00538 491 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00538 491 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00538 491 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00538 491 SUPERFAMILY Cytochrome P450 45 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00538 Spst-Chr2 4339239 4341873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00538 7 487 Cytochrome P450 AT1G05160 54.227 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00538 K04123 K17875 gmx:100775911 661.373