Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00535 ATGGCTGGTTTGGATTTAGGCTTCGTCCAAAGTCTCCACAGACCAGACTTCAACCAACAGCAGCACGAACCCGAGGAAGATGCCAAACAGTCGGACCCCTTTTCGACCGAGGATGGCCCCCACCACGCCAGCCCAGGCGACGTGGTTGGGCGGCGGCCGAGGGGGCGGCCTCCGGGGTCCAAGAACAAGGCGAAGCCGCCGGTGATCATCACCAGGGAGAGCGCCAACACGCTTCGTGCGCACATCCTCGAGGTCGGCAGCGGCTGCGATGTGTTCGACAGCGTCGCCAGCTACGCGCGGCGGCGGCAGCGCGGGATCTGTATTTTGAGCGGCAGCGGCACCGTGACGAATGTGAGCCTGCGGCAGCCGGCGGCGGCGGGGGCTGTGGTGACTCTTCACGGGAGGTTTGAGATACTGTCGCTGACGGGATCGTTCCTTCCTCCGCCGGCTCCTCCCGGGGCGACGAGTCTGAGCGTATACCTTGCCGGAGGACAGGGGCAGGTGGTGGGTGGGAGTGTGGTGGGAGAGTTGACCGCGGCGGGACCGGTGATTGTGATCGCAGCGTCGTTCACCAACGTGGCTTATGAACGTTTGCCGCTGGAAGAAGAAGAAGAACAGGTTCAGATATCTGGTGGTGCTGGTATGGGAAATACCAGTAACAATAATATTAATAACCCTTTTCCTGATCCTTCTTCAGGACTCCCTTTCTTCAATTTGCCCATGAATGTTCAGTTGCCGGTGGATGGTTGGGCGGGAAACTCAACTTCACGTTCACCATTTTGA 783 0.5964 MAGLDLGFVQSLHRPDFNQQQHEPEEDAKQSDPFSTEDGPHHASPGDVVGRRPRGRPPGSKNKAKPPVIITRESANTLRAHILEVGSGCDVFDSVASYARRRQRGICILSGSGTVTNVSLRQPAAAGAVVTLHGRFEILSLTGSFLPPPAPPGATSLSVYLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEEEEQVQISGGAGMGNTSNNNINNPFPDPSSGLPFFNLPMNVQLPVDGWAGNSTSRSPF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00535 260 MobiDBLite consensus disorder prediction 1 69 - -
Spst2g00535 260 SUPERFAMILY AF0104/ALDC/Ptd012-like 75 207 - -
Spst2g00535 260 CDD DUF296 79 162 IPR005175 -
Spst2g00535 260 Gene3D - 78 211 - -
Spst2g00535 260 MobiDBLite consensus disorder prediction 18 36 - -
Spst2g00535 260 FunFam AT-hook motif nuclear-localized protein 78 205 - -
Spst2g00535 260 Pfam Plants and Prokaryotes Conserved (PCC) domain 79 192 IPR005175 -
Spst2g00535 260 ProSiteProfiles PPC domain profile profile. 75 211 IPR005175 -
Spst2g00535 260 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 23 216 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00535 Spst-Chr2 4309626 4310408 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00535 49 260 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 70.233 1.13e-91 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00535 - - gmx:100810911 387.111