Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00528 ATGGACAAAACCCCAAAACGAAAAGTTGCGGTGGTGGCTCCTAACACCTTCACTGAGCTTCACCGAATTTCACTGAACACTGAACCTATCCACACTGAATTCGATAAAATTCTCTCCGATACCCCTCTGGATAATCACGCGGGTTTCAATATGAAGAATGAAACCCTTCGAGCTGATTGGAAAGCTCTTTGGATGAAATCCGAATCCTATTCATCTTTTAATTTGAACAATGGATGGATGGTGCCCTATAGATACGATGATGTCAAGGGTCCCAATTCTGATTCAAACCCTAATGTTGAATCATCTGGTTGGGTTTTGTGCAATGGGGTTCAATTGGAAGACATTTCGTTGAAATGCATGGAAATTATATACAATGATACTGTGTCAAAGCTTGTTGCCTTGGGGTACAACGAGAATGTTGTCGTTAAAGCGATTCTGCATAATGTACATTGTTATGGCGACAATGATTTGGCAACAGACCTGCTGCACAACACCTTGGCTTTTTTGAAAAGGGGGAGTTTGGACATGCATGAGTTCAAGCCTGCGTTCTCTGATTTGAAGAAGCTTGAGGAGTACACTCTGATGAATCTTGTGTCCTTGTTGCAAGAAGTGAGGCTGGAGTTAGGTAAGGGTGATGCTATGTGGTGTCTCCTCATGAGCGATTACAACGTGTTAAAGGCTACTACCATCCATATTCCCGTTGGAAGCGTGTGTCCTCCTCCTTTAACTGAGTTTGAGAACGAGGAAAGGGGATTTAGAAAAGAGGGAGGCTCAGGTTTTCCTTTGAAAGGGTTCTTTTGTGGTAATAAGATGACTGTACAGTTACAGAGAGATATTGAATTCCTGAAAAGATTCGATCTGACTCCTGCGATGATTTATTCTTTGAAAAGAAATGTTGCAGCGTTTGCTGCGGGTTATAGGGCTAACTCAAAACAGGTGCAGTCACAAGCAGGAGAATTTCCTGGGATTAGCACTGTTTCCAAATTGAATTCTTCATCTGTTTTTGTGACCGCGGACCTTCGTGAGCTGCCCGGTGACTCTCACAATATGAATGACCAGGATGACTTGAACTCTTTGCTAAGTAAATTTCATGATCTAAATATTGATGAAAACTTGGAGTTTGTGGCAGCAGATGAGAAGGATACGGTGATAGTCACTCTATTTCATCAGATAAAGGATCTTGAGAAACAGGTCAAGGAGAGGAAAGATTGGGCTCATCAGAAGGCAATCCAAGCTGCAAGAAAGCTAAGCAGCTATCTAATTGAGCTGAAAACGTTCAGGATAGAAAGAGAGGATAATGAAAGGCTGAAGAAGGGGAAAGAGGAAAATGAGGAGCTTGAGGACCCTACCATGGTGAGACTCTTAGAAATGGAGGAGGCCTTGAGAAAGGCTTGTGGTCAAATGGATATAGCAACTGCAGGAGTAGAAAAACTTGAGGCGGAGAAAGCTGAAATCAAAGCAGAGTTAGAAGCTTGTAAATTAAGTGCATCAGAGTCAGTGGCAAGCTGCTTGCAAGTTGCAAAAAGGGAGAAAAAGTTCTTAAAGAAGCTTCTGGCGTCGGAAAAACAGAAAGCGAAGATAAAACAGGATATTTCAGATGAAAAACAGAAGATATTGGAGATACAAGAAGAATTGGCTCATATTAAACAATGTGCAAAAGAAGCTGAGGTCATGAGGGGTGAAGAAGTGAAGGCTAAGGAGGAAGCCTTAGCACTAATTGCAGAGGAACGCCGTTCTAAGGAAGCAGCTGAGGCTAATAAAAAGAGAAATCTTAAGGCTTTAAGCCTGAAGATAGATATAGATTTCCAGCGTCGTAAGGATGATCTCCTAAGACTTGAACAGGAAATTTCGTTTCTTAAAGCATCCGCACAGTCGGCTACTTTGCCTGCGAGGGAGTCTGAGGATGCAGAACCCCAGAGAGAGATAATTGCTAAGCTTCTACAAGAATTAGATAACGTGCCGGATTTGTCTGGAAAAGATGCCATCGTTAATACTGATAGAGGATGCATTATATGTGGAAAAGATGAGGTTTCCGTTATTTTCTTGCCATGCGCACACCAAGTTATGTGTACTAGTTGCAGCAAAGAGTATGGGAGAAATGGCAAAGCTGTTTGTCCATGCTGCCGGGTTCCTATCGAACAGAGAATTCGTATATTTGGGGCAAGTTCCTAG 2172 0.4236 MDKTPKRKVAVVAPNTFTELHRISLNTEPIHTEFDKILSDTPLDNHAGFNMKNETLRADWKALWMKSESYSSFNLNNGWMVPYRYDDVKGPNSDSNPNVESSGWVLCNGVQLEDISLKCMEIIYNDTVSKLVALGYNENVVVKAILHNVHCYGDNDLATDLLHNTLAFLKRGSLDMHEFKPAFSDLKKLEEYTLMNLVSLLQEVRLELGKGDAMWCLLMSDYNVLKATTIHIPVGSVCPPPLTEFENEERGFRKEGGSGFPLKGFFCGNKMTVQLQRDIEFLKRFDLTPAMIYSLKRNVAAFAAGYRANSKQVQSQAGEFPGISTVSKLNSSSVFVTADLRELPGDSHNMNDQDDLNSLLSKFHDLNIDENLEFVAADEKDTVIVTLFHQIKDLEKQVKERKDWAHQKAIQAARKLSSYLIELKTFRIEREDNERLKKGKEENEELEDPTMVRLLEMEEALRKACGQMDIATAGVEKLEAEKAEIKAELEACKLSASESVASCLQVAKREKKFLKKLLASEKQKAKIKQDISDEKQKILEIQEELAHIKQCAKEAEVMRGEEVKAKEEALALIAEERRSKEAAEANKKRNLKALSLKIDIDFQRRKDDLLRLEQEISFLKASAQSATLPARESEDAEPQREIIAKLLQELDNVPDLSGKDAIVNTDRGCIICGKDEVSVIFLPCAHQVMCTSCSKEYGRNGKAVCPCCRVPIEQRIRIFGASS 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00528 723 Pfam Family of unknown function (DUF6592) 120 228 IPR046527 -
Spst2g00528 723 SUPERFAMILY RING/U-box 649 715 - -
Spst2g00528 723 Coils Coil 468 495 - -
Spst2g00528 723 CDD RING-HC_MIP1-like 664 718 - -
Spst2g00528 723 Coils Coil 566 586 - -
Spst2g00528 723 PANTHER OS05G0141500 PROTEIN 69 718 IPR046934 -
Spst2g00528 723 ProSiteProfiles Zinc finger RING-type profile. 669 709 IPR001841 -
Spst2g00528 723 Pfam Zinc finger, C3HC4 type (RING finger) 666 714 - -
Spst2g00528 723 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 657 720 IPR013083 -
Spst2g00528 723 Coils Coil 504 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00528 Spst-Chr2 4249460 4252755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00528 669 719 C3H Transcription Factor Family AT1G73950 39.216 1.86e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00528 - - vra:106777712 1040.02