Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00525 ATGGGAAGCAATGGACTCTGCAATCTCTTTTCTTGCTTCAAAGCCTCTTCCAATCACGACCATGGCCATGGCCATAACCATAACCATAACCATAACCATAACCAGAGCCAGTTGGTTTTCGCCGAGACCGAGCCATTGGATGAAACCCTAGGCCACTCTTTCTGCTATGTTAGATCCTCCGCGCGCTTTCTCTCTCCCTCCCATTCCGATCGCATCCTATCTCCTTCCAACTCTCTCCGCTTCTCCCCCTCTCACCGCTCCGATTTCCCCGAAACCGCATTCAAAGCCATTTCAGGTGCCTCCGTCAGCGCCAACAGCTCCGTCCCAAAAACTGTCCTCCAGTCCGACGACGACGACACCACTCTCAATGGCTTCAAAGGAACCGCGTCCTTCAGCGCTCTGCCTCTCCAGCCCGCGCCCAGAGGAGGAGAAGCTGTTCACTCTGAGAGAGAGCGGAAGGCGTTCTTCCTCTCTGGGCCAATTGAGAGCGGCGCGCTCTCAGGACCCCTCGACGACGCCGTTTCGAGCTCCGCTGGAGTGCCTTTCTCTGCTCCGCTCGGGGGTGGAGTGTTTGTGAAGAAGAAGAGGAAAAAGAGCATTTCCGGGTTGAGGAAAGCCTTCCAGAGGAGTCTCTCGGAGAAGAAACGGCCGTGGGTGGTGCCGGTGGGGCGGAAGGGGAAGACGGAGGCGAAGAGCGAGACGGAGAGCGAGAGCAATGTGCAGTGGGCGCTGGGAAAAGCAGGGGAGGATCGTGTGCATGTGGTTGTATCGGAAGAACAGGGTTGGTTGTTCGTCGGGATATACGACGGTTTCAATGGCCCTGATGCGCCGGAATTTCTCATGGGTAATCTTTACCGTGCCCTCCACAAAGAGCTCCAGGGTTTGTTTTGGGAACTTGACGAACCGCAGCCGCAGGTGCAGGGAACTAACCCTGCACCTGAGGTGGTGGATAGTGAAGCTGAACCCCGGAATGAGGGGGAGGTGGAAGAAGACTCTAATTCCCTCCGAGGATCGGTTAAGAGAGTGACGTTTCAAGCGGAGGGGACTGAGAGTAGGAGGAGAAGGTTGTGGGAATTTCTGGCTGAGGAGGATGACGCTGAGGACGGTCTTGACCTTTCCGGGTCTGATAGGTTTGCGTTTTCGGTTGATGATGCGCTCAGTGCTAGCAAGGAGGGTTCGGGAGGTAGTAAACGGTGGTTGATTTTGTCCAAGTTGAAGCATGGGTTGTCGAGGCATAAGGAGGGTCATGGGAGGAGGTTGTTGCCGTGGAGTTTGGGCGTGGGGGAAGAGGAGAAGAAGGTTGAGGTGGAAAATCCAATTGCGGCAGAGGAGAAGGAGGAGAAGGGTAACGGTGGGAGGAAGCGGAAAGTGGGGCCTGTGGATCATGAGTTAGTTTTGAGAGCGTTGTCTAGGGCGCTTGAGATGACTGAGCTTGCGTATTTGGATATGACGGATAAGTTGATTGATACCAACCCGGAGCTTGCTCTAATGGGGTCGTGTCTGTTGGTTGTGTTGATGAGGGATGAGGATGTTTATGTTATGAACGTGGGGGATAGCCGCGCCATTGTGGCACATTATGAGTGTGAGGAGGTTCATGCTCCTAGCAAGGAAACTGGAAGTGGTGGAGATATTGGGTCAAGCGCGGAGTGCATAGTGGAGGAGTCGTTGGCTCCGGAAGAAGGTGGTGTCGTTTTGAGGAGTGAGGGTCCTGCTCAGGAAAGGAGGTTGGTTGCATTGCAGCTGTCCACTGACCACAGCACCAGCATTGAAGAGGAAGTTGTTAGAATTAAGAATGAGCATCCTGATGATAGCCAATGTATTGTAAATGATAGAGTGAAAGGCCGTCTTAAGGTTACTAGAGCTTTTGGTGCTGGATTTTTGAAACAGCCAAAGTGGAATGATGTGGTGCTAGAAATGTTTCGTAATGTGTATATTGGCACTGCTCCATATATATCCTGCTCCCCTTCATTACGTCACCATAGATTATGCCCTAGAGATCAGTTCTTGATCCTCTCATCTGATGGGTTGTATCAATACCTAAGCAATCAAGAAGTGGTTTCTCAGGTCGAAAGCTTCATGGAAAAGTTTCCAGATGGAGATCCTGCCCAGCATTTAATAGAGGAGCTGCTCCTACGTGCTGCCAAAAAGGCTGGAATGGATTTCCATGAGTTGCTGGATATCCCTCAAGGTGATCGGAGGAAGTATCATGATGATGTAACTGTTATGGTGATATCACTTGAAGGAAGAATCTGGAAATCGTCTGGGAAGTATGTGTGA 2277 0.5178 MGSNGLCNLFSCFKASSNHDHGHGHNHNHNHNHNQSQLVFAETEPLDETLGHSFCYVRSSARFLSPSHSDRILSPSNSLRFSPSHRSDFPETAFKAISGASVSANSSVPKTVLQSDDDDTTLNGFKGTASFSALPLQPAPRGGEAVHSERERKAFFLSGPIESGALSGPLDDAVSSSAGVPFSAPLGGGVFVKKKRKKSISGLRKAFQRSLSEKKRPWVVPVGRKGKTEAKSETESESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRALHKELQGLFWELDEPQPQVQGTNPAPEVVDSEAEPRNEGEVEEDSNSLRGSVKRVTFQAEGTESRRRRLWEFLAEEDDAEDGLDLSGSDRFAFSVDDALSASKEGSGGSKRWLILSKLKHGLSRHKEGHGRRLLPWSLGVGEEEKKVEVENPIAAEEKEEKGNGGRKRKVGPVDHELVLRALSRALEMTELAYLDMTDKLIDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYECEEVHAPSKETGSGGDIGSSAECIVEESLAPEEGGVVLRSEGPAQERRLVALQLSTDHSTSIEEEVVRIKNEHPDDSQCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVVLEMFRNVYIGTAPYISCSPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSQVESFMEKFPDGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYV 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00525 758 SMART PP2C_4 233 744 IPR001932 -
Spst2g00525 758 Pfam Protein phosphatase 2C 579 714 IPR001932 -
Spst2g00525 758 MobiDBLite consensus disorder prediction 303 339 - -
Spst2g00525 758 CDD PP2Cc 461 746 IPR001932 -
Spst2g00525 758 MobiDBLite consensus disorder prediction 318 336 - -
Spst2g00525 758 Gene3D - 204 753 IPR036457 -
Spst2g00525 758 MobiDBLite consensus disorder prediction 437 456 - -
Spst2g00525 758 ProSiteProfiles PPM-type phosphatase domain profile. 233 746 IPR001932 -
Spst2g00525 758 PANTHER PROTEIN PHOSPHATASE 2C 225 745 IPR015655 GO:0004722|GO:0006470
Spst2g00525 758 SUPERFAMILY PP2C-like 245 747 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00525 Spst-Chr2 4233419 4237878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00525 1 758 PP2C-type Phosphatase Gene Family AT2G35350 55.985 0.0 792