Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00523 ATGGATTATCGGGAACCGCATCAGCAACCAACCGCCAAAATCATGGTGGGACCCACCTCCTTCCCTTCCATGTTGGCACCCGCCACTGCCCAATTTCCCGAGTCCTCAAAAAGAAGAAGAGAGTCCGGCCCAGAAAGTACTCACCAGATGGCAACATTGCGTTGGGCCTTGTCCCCAACCACGCCGCGGCTTCTTCCGCCGAGCCTGCCCCAAGAAGCACCGAGGACGCCCCTGGCTCCTGCAAGAAGCAGATGGACGCCCTTGGACATTGCTGCAAAAGTTATGCTCTTCTGTGAGCAAGGACCACGGACAGTATGCATTCTTTCTGCTACTGGTCCTATCCGCAATGTCACCGTTAGACAGTCGCAACTCAGGCACAATATCTAA 387 0.5504 MDYREPHQQPTAKIMVGPTSFPSMLAPATAQFPESSKRRRESGPESTHQMATLRWALSPTTPRLLPPSLPQEAPRTPLAPARSRWTPLDIAAKVMLFCEQGPRTVCILSATGPIRNVTVRQSQLRHNI 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00523 128 MobiDBLite consensus disorder prediction 1 81 - -
Spst2g00523 128 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 24 123 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00523 Spst-Chr2 4222036 4222752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00523 89 122 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 61.765 1.05e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00523 - - pvu:PHAVU_002G006700g 65.855