Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00522 ATGGATAGCAAATCACAAAACAATAAACCATCTGAGGAGGTGACACGTGAGTTACTTATAGCTATCTCTAATTCTTTACCTGACAAAATTCTGGATTCAAATATTCCTGCTGAAGGCAAGGACTCTATGGATAGCAAATCACGGAGCAATAAGTCATCTGAAAGTTATATGAATAACAAATCACAGAACAATAAATCATCTGAGGAGATGACACGTGAGTCACTTATAGCTATCTCTTATTCTTTACCTGATTCAGATAGTGTGGTTGAAGGCAAGGACGCAGATGATTTTGAAAGACCAAATGATGATTGGAAAGATAAAATTAGATCTGAGTTGATTTCAATCTCTTATACTGAATCTCCCTATACTCTAATTGCAGCTTTGTTGGGTGGATATGCATTTGTGTTTGGATTTCTTAGGAGAGTGAATGAATGGTATTATGTTTCAAGGCTGGGAAGGAACATGCAACACCCTCTCCCACCGGGTCATCTGGGTTGGCCTTTCTTCGGGAACATGCTCACCTTCTTCAAAGCTTTCAAGTCTGATCCTGATTCTTTTATCTATGATCTTGTTTTCAGATATGGCAGGACTGGTATGTACAGGACATTCTTGTTTGGGAACCCTAGCATCATAGTTTGCACCCCAGAGACATGTCGTAAGGTTCTCACAGATGATGAACAACTCAAGCTTGGATACCCTGCTTCCACCATGTCCCTCTTTCGAAAGAGATCATTCCATGGCATCTCAAATGTGGAACACAAGCGTCTTCGTCGCCTAACCACCTCTCCCATAACTGGCCACGAGGCATTGTCCATGTACATACCTCTCATAGAAGATGTTTCTGTCGAATTGTTGGAAGAGTTGTCAAGCATGAAAACCCCTTCTGAGTTCCTCACAGAGCTGAGGAAGTTCGCTTTTAAGATCATCACCACCATCTTCATGAGCTCTGACGTTGACCATGTGGACCTTGGCTTGGTCGAAAACTTGTACATAGATTTGAATCGTGGAATGAAGTCCCTTCCCATCAATCTCCCAGGCTTTGCATTCTACAAAGCACTCAAGGCACGAAAGAAGTTGACAAAGTTGCTGCAAGGCCTGGTGGACCGAAAGAGAAGGAACAATAATGCAAAAACAAAGACGAAAAAGGACATGATGGATTTATTGATGGAAGTCAAAGATGAAGAGGGTAGGCAGCTGGAGGATGAAGACATCATAGACTTACTTCTGGTGTTCTTGTTAGCTGGTCACGAAAGTTCTGCTCATGGAATATTGTGGACCATCATCTACCTCACACAACACTCACATTTATTCCAAAGGGCTAAGAAAGAACAAGAAGAGATCATCCAAGCAAGACCTTCCACACAGAAAGGGCTGAACCTTAAGGAAATTAAGCAAATGGAATATCTTTCAAAGGTTATCGATGAGATGCTGCGAAAAACAAGTATCTCGTTTGTGAACTTTAGACAGGCAAAGATCGATCTCAACATCAATGGTTATACTATACCAAAAGGATGGAAAGTTCTAGTTTGGAACCGAGGGGTGCACATGGACCCTGAAACTTACTACAACCCAAAGGAATTCGATCCTTCCAGATGGGAAAATCACACAGCAAGAGCAGGTTCTTTTCTTCCGTTTGGATTAGGAAGCAGATTTTGTCCTGGGAGCGACCTGGCCAAACTTGAGATCACCATTTTCCTCCATCATTTTCTTCTTAACTACAGGATGGAGAGAACTAATCCAGATTCTCCAATCACTTATCTACCACTGCCAAGACCCTCAGATAACTGCCCTGCAAGAATTATAAAAGCCACCTAA 1815 0.4187 MDSKSQNNKPSEEVTRELLIAISNSLPDKILDSNIPAEGKDSMDSKSRSNKSSESYMNNKSQNNKSSEEMTRESLIAISYSLPDSDSVVEGKDADDFERPNDDWKDKIRSELISISYTESPYTLIAALLGGYAFVFGFLRRVNEWYYVSRLGRNMQHPLPPGHLGWPFFGNMLTFFKAFKSDPDSFIYDLVFRYGRTGMYRTFLFGNPSIIVCTPETCRKVLTDDEQLKLGYPASTMSLFRKRSFHGISNVEHKRLRRLTTSPITGHEALSMYIPLIEDVSVELLEELSSMKTPSEFLTELRKFAFKIITTIFMSSDVDHVDLGLVENLYIDLNRGMKSLPINLPGFAFYKALKARKKLTKLLQGLVDRKRRNNNAKTKTKKDMMDLLMEVKDEEGRQLEDEDIIDLLLVFLLAGHESSAHGILWTIIYLTQHSHLFQRAKKEQEEIIQARPSTQKGLNLKEIKQMEYLSKVIDEMLRKTSISFVNFRQAKIDLNINGYTIPKGWKVLVWNRGVHMDPETYYNPKEFDPSRWENHTARAGSFLPFGLGSRFCPGSDLAKLEITIFLHHFLLNYRMERTNPDSPITYLPLPRPSDNCPARIIKAT 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00522 604 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 545 554 IPR017972 GO:0005506|GO:0016705
Spst2g00522 604 PRINTS E-class P450 group I signature 403 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00522 604 PRINTS E-class P450 group I signature 510 534 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00522 604 PRINTS E-class P450 group I signature 552 575 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00522 604 PRINTS E-class P450 group I signature 423 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00522 604 PRINTS E-class P450 group I signature 542 552 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00522 604 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00522 604 PRINTS P450 superfamily signature 552 563 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00522 604 PRINTS P450 superfamily signature 414 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00522 604 PRINTS P450 superfamily signature 543 552 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00522 604 MobiDBLite consensus disorder prediction 49 69 - -
Spst2g00522 604 SUPERFAMILY Cytochrome P450 158 601 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00522 604 CDD CYP90-like 193 600 - -
Spst2g00522 604 PANTHER CYTOCHROME P450 26 157 588 - -
Spst2g00522 604 MobiDBLite consensus disorder prediction 29 69 - -
Spst2g00522 604 Pfam Cytochrome P450 160 579 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst2g00522 604 Gene3D Cytochrome P450 150 603 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00522 Spst-Chr2 4207056 4212217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00522 128 600 Cytochrome P450 AT1G05160 54.717 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00522 K04123 K17875 gmx:100775911 648.662