Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst2g00502 | ATGGCGCTTTATCTTTTCTGTGCTTTTCTTGTTAGCACCTTAGTTTTCATGCAAACTCTGGCTGATACTTCATGCACCGATTGTTTCATTCATTCTCGAGCAGCATATTATCCAAATTCTGACGAACACGGAACAGATGTAGGTGCATGCGGGTTTGGTTCCTTTGGTGCTACGGTCAATGGCGGAGATGTATCAGCTGCATCTTCTCTTTACCGAAATGGTGTTGGTTGTGGCGCCTGTTACCAGGTGAGGTGTACCAACAGTGCCTATTGCTCAAACAATGGTGTGACTGCAGTTATAACTGACCAAGGTTCAAGTCACAACACAGATTTCATTCTTAGCAAACATGCCTTTATTCGGATGGCTCAAACCACTGACGCAGCTGCTTCTCTATTAGCCCTTGGCGTAGTTGATATTGAATATAGACGTGTTTCATGCAGCTACCCAGATAAAAACATAACAATTAAGATAGATGAGAGCAGCAACAACCCTTATTATCTGGCTTTTGTCATTTGGTACCAACAAGGAAGGAGAGATATAACTGCTGTGCAGCTCTGTGAGACTCAAAATTTTGTGTGCAAGTTACTGGATCGGAGCCATGGAGCGGTGTGGACTACTGCCTCTCCACCAAGTGGACCTTTGTCTTTAAGGATGTTGTTTAGTGGTGAAGAAGAGGGAGATGAAACTTGGGTTGTTCCAGTTAATAACATACCCGGAGACTGGAAGGCTGGAGAAACTTACGATTCAGGGGTACAAGTGAACCAATAG | 768 | 0.4401 | MALYLFCAFLVSTLVFMQTLADTSCTDCFIHSRAAYYPNSDEHGTDVGACGFGSFGATVNGGDVSAASSLYRNGVGCGACYQVRCTNSAYCSNNGVTAVITDQGSSHNTDFILSKHAFIRMAQTTDAAASLLALGVVDIEYRRVSCSYPDKNITIKIDESSNNPYYLAFVIWYQQGRRDITAVQLCETQNFVCKLLDRSHGAVWTTASPPSGPLSLRMLFSGEEEGDETWVVPVNNIPGDWKAGETYDSGVQVNQ | 255 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst2g00502 | 255 | Pfam | Lytic transglycolase | 67 | 141 | IPR009009 | - | |
Spst2g00502 | 255 | SUPERFAMILY | PHL pollen allergen | 151 | 249 | IPR036749 | - | |
Spst2g00502 | 255 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 47 | 151 | IPR007112 | - | |
Spst2g00502 | 255 | Pfam | Expansin C-terminal domain | 153 | 232 | IPR007117 | - | |
Spst2g00502 | 255 | Gene3D | - | 148 | 253 | IPR036749 | - | |
Spst2g00502 | 255 | Gene3D | - | 16 | 147 | IPR036908 | - | |
Spst2g00502 | 255 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 165 | 249 | IPR007117 | - | |
Spst2g00502 | 255 | PANTHER | EXPANSIN-B3 | 15 | 252 | - | - | |
Spst2g00502 | 255 | CDD | DPBB_EXLB_N | 30 | 146 | - | - | |
Spst2g00502 | 255 | SUPERFAMILY | Barwin-like endoglucanases | 17 | 150 | IPR036908 | - | |
Spst2g00502 | 255 | PRINTS | Expansin/Lol pI family signature | 46 | 64 | IPR007118 | GO:0005576 | |
Spst2g00502 | 255 | PRINTS | Expansin/Lol pI family signature | 235 | 249 | IPR007118 | GO:0005576 | |
Spst2g00502 | 255 | PRINTS | Expansin/Lol pI family signature | 134 | 150 | IPR007118 | GO:0005576 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst2g00502 | Spst-Chr2 | 4071690 | 4073127 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst2g00502 | 11 | 251 | Expansin Gene Family | AT4G17030 | 42.449 | 2.44e-58 | 184 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst2g00502 | - | - | gmx:100794009 | 499.975 |