Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00483 ATGAACTGTTTCTTCTTCAAAAACAAATCAAAATCCCACCCAGAACTCCCAAAGGGATGGAAGAAGAAAAATCAGGTGGTGAATGGAGCACCTAAATCCCCCAGCACGGTACCGTCACCGAGGAGTATAAAAGAATTGTACAAAGAGAAGAAGCAGAATTTCAGAATCTTCAGTTTGAAAGAGCTGGTAGATGCAACAAATGGTTTCAATAGGATGCTCAAGATTGGAGAAGGTGGTTTTGGGAAAGTATATAGAGGAACAATTAGTCCTCACCCTGAAGATGGAGTTGATCCAACTGTGGTCGCAATAAAAAAACTTAACACGCGTGGCTTACAGGGGCATAAAGAATGGCTTGCAGAGGTTCAATTTCTGGGCGTTGTTAACCACCCTAATTTGGTTAAACTTCTGGGATACTGTTCTATAGACAGTGAAAGAGGAATCCAAAGGTTGTTGGTGTATGAGTACATGCCTAACAGGAGTCTGGAAGATCATCTTTTCAGTTTTTCTTTACCTCCTTTGCCTTGGCCAACAAGATTGAAGATCATGCTCGGTGCTGCTCAAGGATTGTATTATCTACATAACGGATTGGAGATTCAGGTGATCTACCGAGATTTCAAATCTTCAAATGTGTTATTGGACAAGCAATTTCATCCCAAACTGTCAGATTTTGGTCTTGCTAGGGAGGGCCCAGCAGGTGATAAGACTCACGTATCTACAGCGGTAGTGGGGACACAGGGATATGCTGCCCCAGAGTATGTTGAGACGGGTCATCTCAAAGTCCAGAGTGATATTTGGAGTTTTGGTGTGGTGCTTTATGAGATCCTCACAGGGAGACGTGTATTGAATAGAAACCGTCCAATAGGGGAACAAAAGCTTATAGAATGGGTTAAAAATTATCCTGCTAACAGTAGCAGGTTCAACACGATAATTGACCCACGTCTCAAGAACCAATATTCTCTTGGTGCAGCTCGGAAAGTAGCCACGTTGGCAGATTGCTGCTTGAACAAGAATCCTGATGATAGACCCTCGATGAGTCAGATAGTGGAAAGCTTGAAGCAAGCATTGGAGGATTCAGAAACCAAAAACACTTCCCCCAGTATGAATTCTAAATCCACACAATCTAAATTGTTTGAACATATTGGAAGGTTGGAACAAACAAACGATTTCACGTGA 1173 0.4228 MNCFFFKNKSKSHPELPKGWKKKNQVVNGAPKSPSTVPSPRSIKELYKEKKQNFRIFSLKELVDATNGFNRMLKIGEGGFGKVYRGTISPHPEDGVDPTVVAIKKLNTRGLQGHKEWLAEVQFLGVVNHPNLVKLLGYCSIDSERGIQRLLVYEYMPNRSLEDHLFSFSLPPLPWPTRLKIMLGAAQGLYYLHNGLEIQVIYRDFKSSNVLLDKQFHPKLSDFGLAREGPAGDKTHVSTAVVGTQGYAAPEYVETGHLKVQSDIWSFGVVLYEILTGRRVLNRNRPIGEQKLIEWVKNYPANSSRFNTIIDPRLKNQYSLGAARKVATLADCCLNKNPDDRPSMSQIVESLKQALEDSETKNTSPSMNSKSTQSKLFEHIGRLEQTNDFT 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00483 390 Gene3D Phosphorylase Kinase; domain 1 41 155 - -
Spst2g00483 390 Gene3D Transferase(Phosphotransferase) domain 1 156 378 - -
Spst2g00483 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Spst2g00483 390 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 156 365 - -
Spst2g00483 390 MobiDBLite consensus disorder prediction 352 380 - -
Spst2g00483 390 PANTHER OS01G0588500 PROTEIN-RELATED 36 353 - -
Spst2g00483 390 Pfam Protein kinase domain 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00483 390 ProSiteProfiles Protein kinase domain profile. 69 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g00483 390 ProSitePatterns Protein kinases ATP-binding region signature. 75 105 IPR017441 GO:0005524
Spst2g00483 390 CDD STKc_IRAK 75 353 - -
Spst2g00483 390 SUPERFAMILY Protein kinase-like (PK-like) 52 351 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00483 Spst-Chr2 3833628 3836548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00483 1 351 Glycoside Hydrolase AT3G07070 43.251 9.18e-96 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Spst2g00483 Pkinase 4.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00483 - - gmx:100782248 630.943