Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00476 ATGGCGGCCGGAGAGGTGCCCACCGAAGGAGAGTTTGGCGCCAGAACGACGAGAATGAAGATAAGGGTCAAGCTCATCACAACCAGTGCTCTATCTTCCCTCTCTCACCCACCTTCTCCATTGTTTCTCAGGATGGATCCATGGAACCTTTCAACTTCCAAGTTACTCTCTAAACAAGTTGCTTACCCTTCTCATCTCTATGCCGAAGAGATTCCCAACATGGGAAATTCCAGTGGTGTGACCAAGGAGCCTACAGGTTCACAGATGACAATCCTTTATGGTGGCCAAGTTGTTGTCTTTGATGATATTCAAGCTGACAAAGCCAAGGACATCATGTCTTTTGCTATCAAAGGAATGTCCCAAAACCAGAACGACTATGCTTACTCGTTCCCTGCTGCAATTTCTGCTACCTCCAGTAGACCGTTTCCTTTTCTTATGAGTATAATTCCTTCCATTGCCAACACTTCGGTTCAGGAGCACCCTCAAGCACCATCCAAATCTGTTATATGTGATCTACCTTTGGCTAGGAAAGCTTCACTTCATCGGTTTTTGGAGAAAAGAAAGGATAGAATTGCTGCCAGAGCACCATATCAAACAAGCAAACAAATGGCAGCCCTTAATAAGCCATCTGAATCTATGCCATGGCTCACCTTGGCACCTAAATCACCACAAGATGAATCTGATTCTGATAGCAGCTCCAGCTTTGTGAAGAAGATTGCAGTATCATATGAGCCGTGGAAACTTCATTCGGATGAGAAGGAGGACTTCGTGGTAGTTGTTATTTGA 786 0.4504 MAAGEVPTEGEFGARTTRMKIRVKLITTSALSSLSHPPSPLFLRMDPWNLSTSKLLSKQVAYPSHLYAEEIPNMGNSSGVTKEPTGSQMTILYGGQVVVFDDIQADKAKDIMSFAIKGMSQNQNDYAYSFPAAISATSSRPFPFLMSIIPSIANTSVQEHPQAPSKSVICDLPLARKASLHRFLEKRKDRIAARAPYQTSKQMAALNKPSESMPWLTLAPKSPQDESDSDSSSSFVKKIAVSYEPWKLHSDEKEDFVVVVI 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00476 261 SMART tify_2 82 117 IPR010399 -
Spst2g00476 261 Pfam tify domain 84 115 IPR010399 -
Spst2g00476 261 ProSiteProfiles Tify domain profile. 82 117 IPR010399 -
Spst2g00476 261 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 64 208 IPR040390 -
Spst2g00476 261 MobiDBLite consensus disorder prediction 213 232 - -
Spst2g00476 261 Pfam Jas motif 173 198 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00476 Spst-Chr2 3765078 3769691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00476 89 219 Tify Gene Family AT1G19180 38.686 3.24e-23 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Spst2g00476 tify 4.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00476 K13464 - gmx:100800709 300.827