Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00470 ATGGCAACACCAGCTAATAATGGTCATTCTGGAGAAAAAGGATATGACAAGTCATTGATGGAAAATGGGGGTTACACTTTCCTGGCCGGGCCGGTGTATAAGCGGCGTAAAGTATCCGCCGTTCGTGATTTCCCAGATGGATGTGGACCATTTGCTTCAAGGATTGATCAAGTGTTTAACATAAATACTGAGGGCTGTGGTTCTGTTAATGGTCCAATTGTCGAGGTTAAGAATGATGATCATTTAGGGGGTGCTACTTTTAAAACTTCCACCTGTGAAAATGATGGTTGGCATTCTGAGGCAAAAGATTTGCTTTTTACAGAGACTCTTGGCCTAACAACTGACAATGGTTTGGATAAGGACAACCCTGTTGTCTCATCTTATCAAATGGATGGGTCTACTTCTGAAGATGAACCTGCAAAAGTGACTATTAGCCAAACAACTGATTGCAGTTTGAATCAGGAAAAGCTTGTGGTCTCATCTCATCAAGTAGATGGGTCTACTGCAGAAGATGACCCTGACAAACTGATGCTTGGCCAAACAAAGAACTGCAGTTTGAATCTGGAAAATCTTGAGGTCTCATCACATCAAGTGGATGGGTCTATTGCAGAAGATGACCCTGCGAAACTGATGCTTGGCCAAACAAAGAATTGCAGTTTGAATCTAGAAAATCCTGAGGTCTCGTCACATCAAGTGGATGGGTCTATTGTAGAAGTGACTGTTCACCAAACAACTAACTGTGGTTTGAATAAGGAAAACCATATGGTCTCATCTTATCAAGTGGATGAGCCTACTGTAGAAGATGAACCTGCAAAAGTTACTTTAGTAGACCGGGAAACTTTGAATGCAGAGTTTGCCCAAACTACAAACATTGTAAAATGTGACTCCTCTTATATGTTGAAGTCATCATCTCCAGTAGGTGAGATGGCTGTGTCAGGTGGTTCAAAACCCTTATTATCCAATGCCGATATATCTGCTTCCTGTGCTTACATGTTAGAGCCTGTAACAAGAAGGTATCTTCCGCAAAGAAAAGTTTCAGCTATGAGAGACTTCCCTCGTTTATGTGGGCGAAATCCTCCACGTTTTAGTCAGGACAAGGATGTATGTCTCGAGGGGACCTCTTCTTTGAATAACAATATTGAAGGTCAACAGAATCTGGCTGTGGATCGCAATCAATTGAAAAAGTTTGCAGCCACTGATGTAAAAGAAGGTAAAAGTAGCATTCAAGATGAATCTGTTTGCAAGAGAAAGCTTGTTGACATCGATCAAACTGATTCCGTAAGAAATGCTACAGAGAGAGGAAAGAAACTGCGTGCATGTGAACTGTCATCTGAGATGAACAAGTCACCGGAAATTGAGAGAGAAAAGTATGCTACACTCCCTGAAAAAAGTAATCCTCATCAGGTTAGGATACATTCCAAGGCGGTGGTAGAGAAAAATAAGGATGAGATAAAGCCTTTCAATATATCTCGTTCTAAGCATAAGCTGAAAGGGAATTTAAATAGATTGGAGGTCTCATCAGACAGGAAAGTAATACTAGGTTTGATGGCTGATTCAGAATGTCCGTGGAGGTCTGATAAAGGTTCCTCCAAATTTAAGCTGGTTGATGGTAACAATAAAGGCAAGAGAAAGAAAGTGGATTCTTTTGCATTGCCTGACAAATCTAAAACTGATATCAAGACTAAAGGTGCTCGAAATCATTTTGGGAAGAAGTCTTTGAAAAAGGAAAAGGGAAATCCTGCTTCTGAAAGTGTGGGTGAATTCGAACTTTGGGAAAAGGAGGATTGTCTTGATCCTAATGAAAATAATAATGATCTTCAAATTGTTCTGAAATCAAATGAGCTTGATGTAAACATTACACCATCTTCTCATTCTCATTTCACTGGTGATGAGAATGACCCAAATTTGACCCGAAAAAGGGTGAGGGAAACATTACGGTTGTTTCAAGTTGTTTGTAGAAAGCTTTTACAGGAAGTAGAATCAAAGTTAAATGAGCGAGCAAATAGTAAGCGGGTTGATTTAATTGCTGCAAGGATCCTTAGGGAGAATGGAAAATATGTCAACTCAGGCCAGAAGATACTAGGCAGTGTCCCTGGGATTGAAGTTGGTGATGAATTTCAATATAGAGTGGAGCTTAATATAGTTGGCCTTCATCGACCGACTCAAGGTGGAATAGATTATGTGAAGCACAATGGTAAAATCTTTGCAACCAGTATTGTTGCTTCTGGGGCCTATGCTGATGATTTGGATAATCCGGATGTATTGATATATACAGGGCAGGGTGGAAATGTGATGAGCAGTGATAAAGAACCTGAAGATCAGAAGCTTGAGCGGGGCAATCTTGCTTTGTCGAACAGTTGTGTTGAAAAGAAACCTGTTAGGGTGATTCGTGGCTCTGAATCAATGGATGGAAAATGGAAGACTTATGTTTATGATGGACTGTATATAGTTGAGAGCGTTCGGCATGATGTCGGACCACACGGGAAACTGGTTTTTAGGTTTTGCATGCAAAGAGAAAGTGGTCAACCAGAGCTTCCTTTGAGAGAAGTGAAGAAATCTAAAAAGTTCAAGATTAGAGAAGGTGTATGTGTTGCTGATATTTCTTTTGGAAAAGAACGAATTTCCATATGTGCTGTGAACACCATAGATGATGAAAAACCTCCTCAGTTTAATTACATAACTAGCATGATATACCCCAATTGCCATGTCCTTCCTGCCGAAGGATGTGATTGTGTTAATGGATGCTCAGATTTGGAGAAATGTTCGTGTGTAGTGAAAAACGGGGGAGAGATTCCATTCAATCACAATGAGGCTATTGTACAAGCAAAGCCTCTAGTCTATGAGTGTGGACCTGCTTGTAAGTGCCCTTCAACGTGCCATAACAGAGTCAGCCAACTTGGGATAAAGTTTCAACTTGAAATATTTAAAACCAATACAAGGGGATGGGGTGTGAGATCCCTGAATTCTATCCCTTCCGGAAGTTATATCTGTGAATATATAGGAGAGCTTCTTGAAGAAAAGGAAGCTGAACAAAGGGCAGGTAATGATGAGTATCTTTTTGATATTGGAAATAACTACAGCAACAGTACTCTCTGGGATGGACTTTCAACTCTCATGCCAGATGCACAGACAAGTTCCTGCGCTGTTGTGAGGGATGGTGGTTTTACTATTGATGCTGCTCAGTTTGGCAATGTGGGGAGATTCATTAACCATAGTTGCTCCCCTAATTTAATTGCTCAGAACGTTCTTTATGATCATCATGACACCAGAATGCCTCACATAATGTTCTTTGCTGCTGATAACATTCCTCCTTTGCAAGAGCTTACTTACGATTACAATTACGAAATAGATCAAGTCCGTGATTGCGATGGCAATATAAAAAAGAAGTATTGCTACTGTGGTTCTGCGGAATGTACCGGCAGGATGTACTGA 3432 0.4056 MATPANNGHSGEKGYDKSLMENGGYTFLAGPVYKRRKVSAVRDFPDGCGPFASRIDQVFNINTEGCGSVNGPIVEVKNDDHLGGATFKTSTCENDGWHSEAKDLLFTETLGLTTDNGLDKDNPVVSSYQMDGSTSEDEPAKVTISQTTDCSLNQEKLVVSSHQVDGSTAEDDPDKLMLGQTKNCSLNLENLEVSSHQVDGSIAEDDPAKLMLGQTKNCSLNLENPEVSSHQVDGSIVEVTVHQTTNCGLNKENHMVSSYQVDEPTVEDEPAKVTLVDRETLNAEFAQTTNIVKCDSSYMLKSSSPVGEMAVSGGSKPLLSNADISASCAYMLEPVTRRYLPQRKVSAMRDFPRLCGRNPPRFSQDKDVCLEGTSSLNNNIEGQQNLAVDRNQLKKFAATDVKEGKSSIQDESVCKRKLVDIDQTDSVRNATERGKKLRACELSSEMNKSPEIEREKYATLPEKSNPHQVRIHSKAVVEKNKDEIKPFNISRSKHKLKGNLNRLEVSSDRKVILGLMADSECPWRSDKGSSKFKLVDGNNKGKRKKVDSFALPDKSKTDIKTKGARNHFGKKSLKKEKGNPASESVGEFELWEKEDCLDPNENNNDLQIVLKSNELDVNITPSSHSHFTGDENDPNLTRKRVRETLRLFQVVCRKLLQEVESKLNERANSKRVDLIAARILRENGKYVNSGQKILGSVPGIEVGDEFQYRVELNIVGLHRPTQGGIDYVKHNGKIFATSIVASGAYADDLDNPDVLIYTGQGGNVMSSDKEPEDQKLERGNLALSNSCVEKKPVRVIRGSESMDGKWKTYVYDGLYIVESVRHDVGPHGKLVFRFCMQRESGQPELPLREVKKSKKFKIREGVCVADISFGKERISICAVNTIDDEKPPQFNYITSMIYPNCHVLPAEGCDCVNGCSDLEKCSCVVKNGGEIPFNHNEAIVQAKPLVYECGPACKCPSTCHNRVSQLGIKFQLEIFKTNTRGWGVRSLNSIPSGSYICEYIGELLEEKEAEQRAGNDEYLFDIGNNYSNSTLWDGLSTLMPDAQTSSCAVVRDGGFTIDAAQFGNVGRFINHSCSPNLIAQNVLYDHHDTRMPHIMFFAADNIPPLQELTYDYNYEIDQVRDCDGNIKKKYCYCGSAECTGRMY 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00470 1143 SMART preset_2 864 954 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Spst2g00470 1143 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 176 1143 IPR025794 GO:0016571
Spst2g00470 1143 SMART G9a_1 690 842 IPR003105 -
Spst2g00470 1143 SUPERFAMILY SET domain 854 1119 IPR046341 -
Spst2g00470 1143 Gene3D - 677 858 IPR036987 -
Spst2g00470 1143 ProSiteProfiles Pre-SET domain profile. 907 967 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Spst2g00470 1143 ProSiteProfiles Post-SET domain profile. 1127 1143 IPR003616 -
Spst2g00470 1143 Pfam SET domain 981 1113 IPR001214 GO:0005515
Spst2g00470 1143 ProSiteProfiles YDG domain profile. 695 838 IPR003105 -
Spst2g00470 1143 ProSiteProfiles SET domain profile. 970 1113 IPR001214 GO:0005515
Spst2g00470 1143 SMART set_7 970 1119 IPR001214 GO:0005515
Spst2g00470 1143 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 427 1137 - -
Spst2g00470 1143 MobiDBLite consensus disorder prediction 557 580 - -
Spst2g00470 1143 Gene3D SET domain 859 1143 IPR046341 -
Spst2g00470 1143 Pfam Pre-SET motif 867 962 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Spst2g00470 1143 Pfam SAD/SRA domain 694 842 IPR003105 -
Spst2g00470 1143 SUPERFAMILY PUA domain-like 677 851 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00470 Spst-Chr2 3717877 3721308 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00470 635 1140 Su(var)3-9 homologs AT5G04940 40.381 7.46e-112 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Spst2g00470 SAD_SRA 2.2e-47 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00470 K11420 - gmx:100803378 1572.37