Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00469 ATGTTTTGTGCCATAGCTGCCAGACTGCTAATAAAAGTAAAATACCCAGCATCTGTAGAAGGAATTGATAGTCCCTTGTCTAGGTACAAGTGGACAGATGATGCTATCCAAACCCTGAAGCTTTTGTTAAGCATTGCAACAGGCACACCACTCTGGCGCAATGGACCACCCGATAAGCCAGTACTATGCAATGCATGTGGGTCTCGATGGAGGACAAAGGGAACTCTTGCAAATTATACCCCTTTACATGCTCGAACAGAAACTGATGATTATGGGGATCAAAGGGTTTCCACGGTAAAGAGCTTATCAATAAATAAGAAGAGAGAAGTGACATTGCTCAAACAAAAACGTAACCATGATAATTTAGTATCTGGAGGGTTTGCACCTGATTACAACCAGGGATACCAAAAGCTCGTTGATGATGATGTTAGCAACCGATCAAGCTCAGGATCAGCTATCTCTAACTCAGAGAGCTGTGCACAATTTGGTGCCATGGATGCTAGTGATCTGACAGGTCCTGCTCAGTCAGTGGTCTGGGATGCCATGGTGCCTTCAAAAAAGAGGACATGTGTTGGCCGTCCAAAGCCTTCTTCTGTTGAGAAGTTAACAAAAGATTTATGTACTATTCTTCACGAACAACAGTCTTATTTTTCTGCATCTTCTGAAGAAGATCTTCTTTTTGAAAGTGAAACACCAATGGTCTCTGTTGAGATAGGACATGGAAGCGTTCTCATTAGGCATCCTAGCTATATAGCCCGTGAAGAAGAGTCTGAGGCTAGCTCTCTTTCAGTTGATAATAAGCAATGCCCAACGAGTGAGGCATATTCTTATTTTGGCCCCATTCTAATGCATAATGATTCTAGTTACTTGAAGTCATCATCTCTGGAAGTTGAAAAGATCAGGAATTCTACTGGCCTCGGAATGCAGCAGGAGCAACATAAAAGTGACGACTCTCAACTTGACAGAGTACAAATCCTTGGTGATCATGAATCACCGCTGTGCTCAATAGATTTAAATGATATAGTAAACTATGAAGAGTTTTTGAGAATCTTGACAAATGAAGAGCAACAACAGTTACTGAAGTTACTTCCTGTGGTTGATACTGCTAAACTTCCTGATAGCCTTAAAGTCATGTTCAATAGCTCTCAATTCAAGGAGAACTTAAATTATTTTCAGCAGCTTCTGGCGGAAGGAGTTTTTGATATCTCTTTGTTGGGGGCAAAACCTGAAGACTGCAAGACTTTGAAAAGACTTGCACTATCCAATCTGTCAAAGTCAAAATGGGTAGAGCACTATAATTTTGTCAAGAAATGTGAAAACAAAACTGGAAAATTGGATTCTTTTGGATCTGCTGGTACATCATCAACTAATGGTTGGAACAGCGAGGCATCAACTAATTTTGGGAACAGCAAGGAATCAACTAACGTTCCAAACAAGAGAACACTCGATAGCAGAAGTCAAAACTTCTCAGAACTGAAGACAATAATGAGGAGCCCCAAAGGAATGAACACAAAGGCTGGCTGTGAGGGTAAAGAAGCTGTAGAAGATGGTGCTTGCTATAGTCCAAAAAGCCTATTTGCTTTGCCTCCTGATGCCAGTTCACTCATGCTTAGTTCTTTAAACTTTGTGGAGGAAAGTAGTGATCAGGATCTGCTGCTAGAGGTGCCATCTAACACTTCTTTTCCACAGGCAGAGCTCTTGCACCCAAGTTTAAGCCTTGGCGCTCAAGCCAGCACTAGTAGTACCTCTGTCTACTCCCATCTTATTTATCAATAA 1776 0.4144 MFCAIAARLLIKVKYPASVEGIDSPLSRYKWTDDAIQTLKLLLSIATGTPLWRNGPPDKPVLCNACGSRWRTKGTLANYTPLHARTETDDYGDQRVSTVKSLSINKKREVTLLKQKRNHDNLVSGGFAPDYNQGYQKLVDDDVSNRSSSGSAISNSESCAQFGAMDASDLTGPAQSVVWDAMVPSKKRTCVGRPKPSSVEKLTKDLCTILHEQQSYFSASSEEDLLFESETPMVSVEIGHGSVLIRHPSYIAREEESEASSLSVDNKQCPTSEAYSYFGPILMHNDSSYLKSSSLEVEKIRNSTGLGMQQEQHKSDDSQLDRVQILGDHESPLCSIDLNDIVNYEEFLRILTNEEQQQLLKLLPVVDTAKLPDSLKVMFNSSQFKENLNYFQQLLAEGVFDISLLGAKPEDCKTLKRLALSNLSKSKWVEHYNFVKKCENKTGKLDSFGSAGTSSTNGWNSEASTNFGNSKESTNVPNKRTLDSRSQNFSELKTIMRSPKGMNTKAGCEGKEAVEDGACYSPKSLFALPPDASSLMLSSLNFVEESSDQDLLLEVPSNTSFPQAELLHPSLSLGAQASTSSTSVYSHLIYQ 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00469 591 Gene3D - 322 426 IPR038108 -
Spst2g00469 591 Pfam GATA zinc finger 47 75 IPR000679 GO:0006355|GO:0043565
Spst2g00469 591 PANTHER OSJNBB0038F03.10 PROTEIN 48 585 IPR044589 -
Spst2g00469 591 Pfam Asx homology domain 318 409 IPR028020 -
Spst2g00469 591 MobiDBLite consensus disorder prediction 450 482 - -
Spst2g00469 591 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 329 441 IPR044867 -
Spst2g00469 591 SMART GATA_3 46 87 IPR000679 GO:0006355|GO:0043565
Spst2g00469 591 CDD ZnF_GATA 49 87 IPR000679 GO:0006355|GO:0043565
Spst2g00469 591 Gene3D - 45 120 IPR013088 GO:0006355|GO:0008270
Spst2g00469 591 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 47 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00469 Spst-Chr2 3700608 3708371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00469 46 568 C2C2-Gata Transcription Factor Family AT4G17570 49.440 8.04e-142 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Spst2g00469 ASXH 7.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00469 - - gmx:100803914 875.93