Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00459 ATGTGCCGGCAAAACTCTCCGGTGCACCATTCCGGTGAAGAAGAAGTTGCAGCTGACGAGAGCCTTTTGATTTATTGCAAGCCTGTTGAACTGTACAATATTCTCTACCGCCGCGGTCGTAAAAATCCTTCCTTTCTCAGGAGATGTTTGCGTTACAAAATAAGAGCGAGGCGGAAAAGGAGGTTGAGAGCAGGGATTGTGATTTTCAATTACAGGGACCGCTACAACATGCTTCGAAAAACTGAAGTGACTGAAGACTTTTCTTGCCCGTTTTGCTTGATGAAGTGTGGAAGCTTTAAGGGTTTGCGATTTCATCTATGTTCATCACATGATCTGTTCAACTTTGAGTTCTGGGTTACTGAAGATTACCAAGCGGTGAACGTCTCTGTAAAAATTGATATATTGAGATCAGAGAATGTTGCTAATGGAGTAATTCCACAATCGCAAACCTTTGTTTTCTGCTCAAGACCTCGAAAGCGTAGAAGAAAGGACTCTGTTCAAACTGAAAAGCGAACCAATGTAAAATTCTTGGAGTTGGACTCACCGGAAGGTGTACAGAATGGATTTATACAAAAAGATGATGATATCTTATCCTGCAAAGGGGAGAACGTGTCTAGAACATCTCGCAATGAGAAGATACTGCCTAGTGGAAGAAATGATGGAGGGAAATTTGGTCCTGATCATCCTGGAACCATGGACGACCTTGAGCATGTTGAATCCAGTTTCAACATTCCAGGTGTTTCAATTGCCATGCCCCAATCTTCTGGAGACCCTGAATGTAGTAAATCAATATGTAAAAGTGATCCTGCTGTGCCTGCTAAAACAAAGAAGCCAAGCATGGATCGATCAGACTCAAGAAACCGGATGCTTCTGCAGAAGAGACTGTTCTTTCACTCACACAGGGTCCAGCCTATGGCACTAGAGCAAGTGTTATCAGACCGTGATAGTGAAGATGAAGTTGATGACGACATTGCAGATCTTGAAGATAGAAGGATGCTTGATGATTTCGTGGATGTTTCTAGAGATGAAAAACAGCTCATGCATCTCTGGAATTCTTTTATGAGGAAGCAAAGGGTGCTGGCAGATGGTCATGTTCCGTGGGCCTGTGAGGCATTTTCCAAGCTTCATGGAAAAGAGCTGGTCACATCTCCAGCTTTATTTTGGTGTTGGAGGTTATTCATGATTAAACTTTGGAATCACGGTCTTCTTGATGCCTGCACAATGAACAACTGTAGCATAGTATTAGATAGTTACAGAAACGAGGGATTGGGTAGTACCAAAAATTGA 1287 0.4266 MCRQNSPVHHSGEEEVAADESLLIYCKPVELYNILYRRGRKNPSFLRRCLRYKIRARRKRRLRAGIVIFNYRDRYNMLRKTEVTEDFSCPFCLMKCGSFKGLRFHLCSSHDLFNFEFWVTEDYQAVNVSVKIDILRSENVANGVIPQSQTFVFCSRPRKRRRKDSVQTEKRTNVKFLELDSPEGVQNGFIQKDDDILSCKGENVSRTSRNEKILPSGRNDGGKFGPDHPGTMDDLEHVESSFNIPGVSIAMPQSSGDPECSKSICKSDPAVPAKTKKPSMDRSDSRNRMLLQKRLFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSRDEKQLMHLWNSFMRKQRVLADGHVPWACEAFSKLHGKELVTSPALFWCWRLFMIKLWNHGLLDACTMNNCSIVLDSYRNEGLGSTKN 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00459 428 MobiDBLite consensus disorder prediction 253 285 - -
Spst2g00459 428 CDD VEFS-box_EMF2-like 291 418 - -
Spst2g00459 428 CDD ZnB-Zn_EMF2-like 13 134 - -
Spst2g00459 428 Pfam VEFS-Box of polycomb protein 279 412 IPR019135 -
Spst2g00459 428 PANTHER POLYCOMB GROUP PROTEIN 9 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00459 Spst-Chr2 3621757 3629857 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00459 1 68 C2H2 Transcription Factor Family AT5G51230 55.882 2.34e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00459 - - gmx:100807112 788.875