Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g00455 ATGTACGAAGAAACTAGCTACGAGTCCGATTTGGCTCTTTTGGATTCCATTCGCCGCCACTTACTCGGGGACTCCGAGGATCACAAATTCGGAGACCCCAATGTTGTTATCTCCGGTAACACTCCACTTTACTCTCGGAGCTCCAGTTTCAGCAGGTTGTACCCGTGTTTGAGTAACGATTGGGGAGAACTTCCTCTTAAGGAAGATGATTCGGAGGACATGGTGCTCTACAGTGTTCTCCGCGATGCCATCGACTTAGGGTGGGTCCCATCTCTCGACGCAGGATCACCGGAAAGTTTCTCGTCGTGTTTCACCCCGGAAGTGACGGTGAAACCCGAACCGGATGTATTTCCGGCGCCGGAACCTGTTTTCACCCCTCCGGTGGTTCAGAAGGATGCAGCGGCGGTTGTTCCGGCGAAGGGGAAGCACTACCGGGGCGTTCGGCAGCGGCCGTGGGGGAAATTCGCGGCGGAAATCCGCGACCCGGCTAAAAACGGAGCTCGGGTTTGGCTCGGAACGTTTGAGACGGCCGAGGACGCCGCGCTGGCATACGATCGAGCCGCGTATCGAATGCGCGGCTCGAGGGCTTTGTTGAATTTCCCGCTTCGGATTAATTCGGGCGAGCCCGAACCGGTTCGGGTGACGTCGAAGCGGAGTTCGCCGGAGCCTTCATCTTCGTCGGAGAGTGGATCGGTGGCGAAGCGGCGGAAGAAAGCGGTGCGGTCGACGGTGACGGCTCCAAGTGGATTGAGAACGGGGCAAGTGGGAAGTCAAGTGGCCGAGTGCACACGTGTGGAGCAGTTGTTGGTTAACTAA 816 0.5748 MYEETSYESDLALLDSIRRHLLGDSEDHKFGDPNVVISGNTPLYSRSSSFSRLYPCLSNDWGELPLKEDDSEDMVLYSVLRDAIDLGWVPSLDAGSPESFSSCFTPEVTVKPEPDVFPAPEPVFTPPVVQKDAAAVVPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRINSGEPEPVRVTSKRSSPEPSSSSESGSVAKRRKKAVRSTVTAPSGLRTGQVGSQVAECTRVEQLLVN 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g00455 271 Gene3D AP2/ERF domain 142 204 IPR036955 GO:0003700|GO:0006355
Spst2g00455 271 CDD AP2 142 201 IPR001471 GO:0003700|GO:0006355
Spst2g00455 271 SMART rav1_2 143 207 IPR001471 GO:0003700|GO:0006355
Spst2g00455 271 MobiDBLite consensus disorder prediction 208 256 - -
Spst2g00455 271 ProSiteProfiles AP2/ERF domain profile. 143 201 IPR001471 GO:0003700|GO:0006355
Spst2g00455 271 Pfam AP2 domain 143 193 IPR001471 GO:0003700|GO:0006355
Spst2g00455 271 PRINTS Ethylene responsive element binding protein signature 167 183 IPR001471 GO:0003700|GO:0006355
Spst2g00455 271 PRINTS Ethylene responsive element binding protein signature 144 155 IPR001471 GO:0003700|GO:0006355
Spst2g00455 271 PANTHER DNA-BINDING DOMAIN 131 233 IPR044808 GO:0003700|GO:0009873
Spst2g00455 271 FunFam Ethylene-responsive transcription factor 2 142 202 - -
Spst2g00455 271 SUPERFAMILY DNA-binding domain 143 203 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g00455 Spst-Chr2 3603104 3603919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g00455 8 270 AP2-EREBP Transcription Factor Family AT4G17500 54.930 4.17e-85 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Spst2g00455 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g00455 K09286 - gmx:100819649 373.244